Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0449
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.7  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   4.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.1  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 515 RRRSSGVTSLVIWLRWCRRS 574
           R +S G+ +  IW  WC ++
Sbjct: 559 RLKSRGIRTAAIWPLWCSQN 578


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 123 VIPHPRVPQLPPRHIHL 173
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 123 VIPHPRVPQLPPRHIHL 173
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 123 VIPHPRVPQLPPRHIHL 173
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 14/57 (24%), Positives = 23/57 (40%)
 Frame = -1

Query: 609 RSRGGTRSTERWLRRHHRSQITSEVTPELRLLVKPPRNTCLYLSLKAKLSAWVGKYL 439
           R R  T S E     +  +Q+  +V  +  +   PPR   +   +K     W  K+L
Sbjct: 4   RHRFATGSPEETEPLYSSTQMPEKVREKWNVFDDPPREPTVGSEVKRTYIEWGVKFL 60


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 14/57 (24%), Positives = 23/57 (40%)
 Frame = -1

Query: 609 RSRGGTRSTERWLRRHHRSQITSEVTPELRLLVKPPRNTCLYLSLKAKLSAWVGKYL 439
           R R  T S E     +  +Q+  +V  +  +   PPR   +   +K     W  K+L
Sbjct: 4   RHRFATGSPEETEPLYSSTQMPEKVREKWNVFDDPPREPTVGSEVKRTYIEWGVKFL 60


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 126 IPHPRVPQLPP 158
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 658 HAGPSPLPTSAARRVRAKSRGYTKHREVAPAAPPEPDYQRSNA 530
           H   SPL  SAA R  ++    ++    A +A P+ + + S+A
Sbjct: 111 HPYLSPLFHSAAPRTASRETKSSESDSGASSADPDDELRSSSA 153


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 126 IPHPRVPQLPP 158
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,154
Number of Sequences: 336
Number of extensions: 3722
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)