Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0449
(762 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 160 1e-41
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 160 1e-41
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 24 1.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 24 1.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 24 1.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.4
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 160 bits (388), Expect = 1e-41
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV
Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80
Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTR 517
IRYFPTQALNFAFKDKYKQVFLGG+ +
Sbjct: 81 IRYFPTQALNFAFKDKYKQVFLGGVDK 107
Score = 63.3 bits (147), Expect = 2e-12
Identities = 32/73 (43%), Positives = 40/73 (54%)
Frame = +1
Query: 508 LDKKTQFWRYFAGNLAPVVPPEPPLCASCTXXXXXXXXXXXXXXRAMGQREFSGLGNCIS 687
+DK TQF RYF GNLA +A G+REF+GLGNC++
Sbjct: 105 VDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLT 164
Query: 688 KIFKSDGLIGLYR 726
KIFK+DG+ GLYR
Sbjct: 165 KIFKADGITGLYR 177
Score = 52.8 bits (121), Expect = 3e-09
Identities = 30/58 (51%), Positives = 33/58 (56%)
Frame = +3
Query: 585 CFVYPLDFARTRLAADVGKGDGPA*ILRSRKLHQQDLQVRRSDRSVQKFGVSVQGIII 758
CFVYPLDFARTRLAADVGK G + + + FGVSVQGIII
Sbjct: 131 CFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIII 188
Score = 39.5 bits (88), Expect = 3e-05
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 198 MSNLADPVAFAKDFLAGGI 254
MS LADPVAFAKDFLAGG+
Sbjct: 1 MSGLADPVAFAKDFLAGGV 19
Score = 27.5 bits (58), Expect = 0.14
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.8 bits (44), Expect = 7.1
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 260 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
A S V P++ + L V K ++ + G+ + +I K G+ +RG +V
Sbjct: 127 ATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQ 184
Query: 440 RYFPTQALNFAFKD 481
+A F F D
Sbjct: 185 GIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 160 bits (388), Expect = 1e-41
Identities = 72/87 (82%), Positives = 81/87 (93%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANV
Sbjct: 21 AAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANV 80
Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTR 517
IRYFPTQALNFAFKDKYKQVFLGG+ +
Sbjct: 81 IRYFPTQALNFAFKDKYKQVFLGGVDK 107
Score = 63.3 bits (147), Expect = 2e-12
Identities = 32/73 (43%), Positives = 40/73 (54%)
Frame = +1
Query: 508 LDKKTQFWRYFAGNLAPVVPPEPPLCASCTXXXXXXXXXXXXXXRAMGQREFSGLGNCIS 687
+DK TQF RYF GNLA +A G+REF+GLGNC++
Sbjct: 105 VDKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLT 164
Query: 688 KIFKSDGLIGLYR 726
KIFK+DG+ GLYR
Sbjct: 165 KIFKADGITGLYR 177
Score = 52.8 bits (121), Expect = 3e-09
Identities = 30/58 (51%), Positives = 33/58 (56%)
Frame = +3
Query: 585 CFVYPLDFARTRLAADVGKGDGPA*ILRSRKLHQQDLQVRRSDRSVQKFGVSVQGIII 758
CFVYPLDFARTRLAADVGK G + + + FGVSVQGIII
Sbjct: 131 CFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIII 188
Score = 39.5 bits (88), Expect = 3e-05
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3
Query: 198 MSNLADPVAFAKDFLAGGI 254
MS LADPVAFAKDFLAGG+
Sbjct: 1 MSGLADPVAFAKDFLAGGV 19
Score = 27.5 bits (58), Expect = 0.14
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 21.8 bits (44), Expect = 7.1
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 260 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
A S V P++ + L V K ++ + G+ + +I K G+ +RG +V
Sbjct: 127 ATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQ 184
Query: 440 RYFPTQALNFAFKD 481
+A F F D
Sbjct: 185 GIIIYRAAYFGFYD 198
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 535 YFAGNLAPVVPPEPPLCASC 594
+F+G+ AP P + LC C
Sbjct: 529 FFSGSCAPGAPLDSKLCQQC 548
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 535 YFAGNLAPVVPPEPPLCASC 594
+F+G+ AP P + LC C
Sbjct: 529 FFSGSCAPGAPLDSKLCQQC 548
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 535 YFAGNLAPVVPPEPPLCASC 594
+F+G+ AP P + LC C
Sbjct: 529 FFSGSCAPGAPLDSKLCQQC 548
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 496 VPRRLDKKTQFWRYFAGNLAPVVPPEPPL 582
+ R DK + F +A + PPEPP+
Sbjct: 157 IERNGDKPPLTYHQFQTVVASMDPPEPPV 185
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,096
Number of Sequences: 438
Number of extensions: 4322
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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