Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0447
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   0.98 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.3  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   3.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   3.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   3.0  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   3.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   4.0  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   5.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 430 PQAVLDVLKWYDASATQPPPSKYMTSVRCTLRIQVPQYQEC 552
           PQ V +V +   ++    PPS+ +T+  CT    V    +C
Sbjct: 394 PQPVEEVTQKPSSTKAPAPPSRDLTTTLCTKAGYVRDPDDC 434


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 553 HRVVHLHLHLPTQSIQNLPHHHRHDQTALQVFTXS 657
           H + HL   L  QSI N+     HD+  + + T S
Sbjct: 134 HLLGHLQTDLMGQSIFNITSPDDHDRLRMYINTES 168


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 351 GIHWYARGMGATSD 392
           G+ WYAR + AT+D
Sbjct: 282 GVFWYARLLYATAD 295


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 583 PTQSIQNLPHHHRHDQTALQ 642
           PT S     H HR+ + ALQ
Sbjct: 152 PTNSCMEYQHLHRYKEEALQ 171



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 430 PQAVLDVLKWYDASATQPPPS 492
           PQ VL   KW       P P+
Sbjct: 190 PQPVLPTYKWMQVKRNVPKPT 210


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -1

Query: 209 HQALSEEVSCRLKLQSLLYQWHDYLLDAP 123
           H  L+   S  L    + + WH Y+ D P
Sbjct: 137 HLVLAFLYSFDLFANGITFGWHTYIFDVP 165


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 583 PTQSIQNLPHHHRHDQTALQ 642
           PT S     H HR+ + ALQ
Sbjct: 152 PTNSCMEYQHLHRYKEEALQ 171



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 430 PQAVLDVLKWYDASATQPPPS 492
           PQ VL   KW       P P+
Sbjct: 190 PQPVLPTYKWMQVKRNVPKPT 210


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 583 PTQSIQNLPHHHRHDQTALQ 642
           PT S     H HR+ + ALQ
Sbjct: 152 PTNSCMEYQHLHRYKEEALQ 171



 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 430 PQAVLDVLKWYDASATQPPPS 492
           PQ VL   KW       P P+
Sbjct: 190 PQPVLPTYKWMQVKRNVPKPT 210


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 339 IKTNMNGVFKVCWXTNXWFIII 274
           I  NM+ +  V + TN +FIII
Sbjct: 158 IDNNMSYIIIVSFATNLYFIII 179


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 412 QEQKNNPQAVLDVL 453
           QEQ NN   VLDV+
Sbjct: 10  QEQNNNVPVVLDVI 23


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/28 (28%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 113 PAPPVRLTSNRATDRVDSVASVD-MRPL 193
           PAPP++  +  +TD+  + A  + ++P+
Sbjct: 40  PAPPIKFINKSSTDKFGNGAIYEVLKPI 67


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 502 SYTSKEEVELQTHHTISVHLIRP 434
           +YTS + VEL+     S +L RP
Sbjct: 91  AYTSSQLVELEREFHRSKYLCRP 113


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 502 SYTSKEEVELQTHHTISVHLIRP 434
           +YTS + VEL+     S +L RP
Sbjct: 111 AYTSSQLVELEREFHRSKYLCRP 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,910
Number of Sequences: 336
Number of extensions: 2686
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)