Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0446
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   1.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   4.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  

>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 331 LKKLHELTNENK--FMGTFGQQQICHNAQ 411
           +KK  E+T ++    MG   QQQI HN Q
Sbjct: 215 VKKREEVTQKDSPMNMGHLTQQQIIHNTQ 243


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 79  KNVSHFI*CYLNDYLLFNVSGTICI 5
           KN+S FI   LN+Y  F+ +G   I
Sbjct: 297 KNISEFINVVLNNYPDFSAAGFFSI 321


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 579 VSYIPLNTLHTWYQNFERRL-QQNPNFWK 662
           ++ + L  + TW+ N  RRL ++N   W+
Sbjct: 123 ITKMTLTQVSTWFANARRRLKKENKMTWE 151


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -2

Query: 400 DISAAVQMCP*ICFHLLAHVVFLNLIS 320
           +I+A+  + P   +H+  H+V   LIS
Sbjct: 46  NITASAVLLPFAIYHIFMHIVPTKLIS 72


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 187 YCYMVDAVCFCDCGQESSLS 128
           YC  +  V FCDC  ++SL+
Sbjct: 291 YCLFLLFV-FCDCSHQASLN 309


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 187 YCYMVDAVCFCDCGQESSLS 128
           YC  +  V FCDC  ++SL+
Sbjct: 291 YCLFLLFV-FCDCSHQASLN 309


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 187 YCYMVDAVCFCDCGQESSLS 128
           YC  +  V FCDC  ++SL+
Sbjct: 291 YCLFLLFV-FCDCSHQASLN 309


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 245 WPDQPHLLTGSYLV 286
           WPD P L++  Y V
Sbjct: 484 WPDTPDLISDGYRV 497


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 744 YACSLGMSYRMKC 782
           Y C  G+SY + C
Sbjct: 576 YVCRSGLSYHLSC 588


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,543
Number of Sequences: 336
Number of extensions: 4273
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)