Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0445
         (681 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42847-3|AAA83605.2|  210|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z75526-3|CAA99769.1|  578|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.     28   7.1  
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated...    28   7.1  
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated...    28   7.1  
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated...    28   7.1  
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated...    28   7.1  
Z83223-6|CAB05719.1|  884|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z81538-6|CAB04387.1|  884|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U55363-9|AAA97967.1|  184|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AC024753-9|AAF60460.1|  139|Caenorhabditis elegans Hypothetical ...    27   9.4  

>U42847-3|AAA83605.2|  210|Caenorhabditis elegans Hypothetical
           protein F39H12.3 protein.
          Length = 210

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +2

Query: 302 QGGRIQVPDDLREILLEFTISYLLEQPGDVINYAVEFFTRLQNNR--TTTIVRGPVA 466
           Q  +  VP DLR IL       L  QP DV  +   FF     +R     I++ P A
Sbjct: 3   QRNKCFVPHDLRPILEALAREVLRSQPSDVAEFGHMFFDEYLKHRRENRNILKDPAA 59


>Z75526-3|CAA99769.1|  578|Caenorhabditis elegans Hypothetical
           protein C06H2.3 protein.
          Length = 578

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 547 AETYDPEEDDSDEGAPAVFPKSDAQRARLAE 639
           +E  DP  +D D  +PA+ PK +A + RL +
Sbjct: 157 SEKADPSYEDYDARSPAMLPKIEAFKQRLED 187


>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
          Length = 1338

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTHREPVSLKRSXG 652
           A+ +  NP SPR  TP     TK P+  SP + H   V +    G
Sbjct: 633 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEHSMEVLIATKRG 673


>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
           protein 89, isoform c protein.
          Length = 1393

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTHREPVSLKRSXG 652
           A+ +  NP SPR  TP     TK P+  SP + H   V +    G
Sbjct: 597 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEHSMEVLIATKRG 637


>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
           protein 89, isoform d protein.
          Length = 1396

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 518 ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTHREPVSLKRSXG 652
           A+ +  NP SPR  TP     TK P+  SP + H   V +    G
Sbjct: 600 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEHSMEVLIATKRG 640


>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
            protein 89, isoform f protein.
          Length = 7441

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 518  ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTHREPVSLKRSXG 652
            A+ +  NP SPR  TP     TK P+  SP + H   V +    G
Sbjct: 6645 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEHSMEVLIATKRG 6685


>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
            protein 89, isoform b protein.
          Length = 8081

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 518  ALTIGANPFSPRLMTPKRMILTKEPLPCSPSRTHREPVSLKRSXG 652
            A+ +  NP SPR  TP     TK P+  SP + H   V +    G
Sbjct: 7285 AINLSPNPKSPRRSTPG----TKSPVVLSPRQEHSMEVLIATKRG 7325


>Z83223-6|CAB05719.1|  884|Caenorhabditis elegans Hypothetical
           protein E01G4.6 protein.
          Length = 884

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 580 DEGAPAVFPKSDAQRARLAEAVXGHTAV 663
           D+  PAVF  SD+ + + AEA   HT V
Sbjct: 435 DKDTPAVFTISDSLKHKKAEAKLAHTIV 462


>Z81538-6|CAB04387.1|  884|Caenorhabditis elegans Hypothetical
           protein E01G4.6 protein.
          Length = 884

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 580 DEGAPAVFPKSDAQRARLAEAVXGHTAV 663
           D+  PAVF  SD+ + + AEA   HT V
Sbjct: 435 DKDTPAVFTISDSLKHKKAEAKLAHTIV 462


>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
           protein T23H2.3 protein.
          Length = 1009

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 388 RDQLRGRVLHKVTKQQDDDHRTGSCRR 468
           + QLR R+L K  KQQ D   TG   R
Sbjct: 123 KQQLRERLLRKSIKQQSDQDLTGGSSR 149


>U55363-9|AAA97967.1|  184|Caenorhabditis elegans Hypothetical
           protein ZC404.1 protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 460 RTPYDGRRPVVL*PCEELDRVVDHVPRLLQQ 368
           R PY  R+P +  P  +L+ +  HV RL++Q
Sbjct: 22  RRPYRPRKPYLPRPPSQLEIIQQHVMRLIKQ 52


>AC024753-9|AAF60460.1|  139|Caenorhabditis elegans Hypothetical
           protein Y23H5B.2 protein.
          Length = 139

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 652 APGPLQRDGLSVRPTWGTRQGLLRQNHPLRGHKSRRKRICAD 527
           AP P  + G+  +     ++G  R     +  KS +K++C D
Sbjct: 82  APAPPAKSGVPAKSAEKAKEGSQRSARLKKEQKSEKKKVCVD 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,410,490
Number of Sequences: 27780
Number of extensions: 276913
Number of successful extensions: 668
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)