Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0444
(720 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g08860.1 68414.m00987 copine, putative Similar to BONZAI1 [Ar... 33 0.25
At1g76580.1 68414.m08911 SPL1-Related3 protein (SPL1R3) identica... 30 1.8
At4g00240.1 68417.m00031 phospholipase D beta 2 / PLD beta 2 (PL... 29 4.1
At4g24740.2 68417.m03540 protein kinase (AFC2) identical to prot... 28 7.2
At4g24740.1 68417.m03541 protein kinase (AFC2) identical to prot... 28 7.2
At5g14620.1 68418.m01714 cytosine methyltransferase (DRM2) ident... 27 9.5
At1g61080.1 68414.m06877 proline-rich family protein 27 9.5
At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.5
At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.5
>At1g08860.1 68414.m00987 copine, putative Similar to BONZAI1
[Arabidopsis thaliana] GI:15487382; contains Pfam
profile PF00168: C2 domain
Length = 589
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 176 CFNQDM*GGGAAIGGEQRREAAEPASTEIADGDTANGFFR 57
C + D+ GG AIGG Q+R + + A D + FFR
Sbjct: 4 CLSGDVKGGKQAIGGVQQRPTSSTIANNAAHNDAVDFFFR 43
>At1g76580.1 68414.m08911 SPL1-Related3 protein (SPL1R3) identical
to cDNA partial mRNA for SPL1-Related3 protein (SPL1R3
gene) GI:6006428
Length = 488
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Frame = +3
Query: 426 EPHPLNGGAPCQGQAVQRTADCLPCQSASLDDGGLGRSGQCAVQTAGRFRRRSCTGDTLV 605
+P P+N G + T D L SASL G A + G F + T +
Sbjct: 66 QPSPMNPQNSMNGASSPSTMDLLAALSASL---GSSAPEAIAFLSQGGFGNKESNDRTKL 122
Query: 606 PGHTRNTPIALE-TTVEFMEFPRTVTSSVHRESPSPWS 716
+ +LE T+EF F +S SPS +S
Sbjct: 123 TSSDHSATTSLEKKTLEFPSFGGGERTSSTNHSPSQYS 160
>At4g00240.1 68417.m00031 phospholipase D beta 2 / PLD beta 2
(PLDBETA2) / PLDdelta1 identical to SP|O23078
Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD
beta 2) (PLDdelta1) [Arabidopsis thaliana]; contains
Pfam profiles: PF00614 phospholipase D.active site
motif, PF00168 C2 domain
Length = 927
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 124 RCSPPMAAPPPHISWLKHGAPLQQDH 201
R +PP APP H + H PL H
Sbjct: 17 RPNPPYPAPPHHHGSMSHSGPLDHHH 42
>At4g24740.2 68417.m03540 protein kinase (AFC2) identical to protein
kinase AFC2 [Arabidopsis thaliana] SWISS-PROT:P51567
Length = 324
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 525 GLGRSGQCAVQTAGRFRRRSCTGDTLVPGHTRNTPIALETTVEFMEFPRTVTSSVHRES 701
GLG S C V + G CTG+ L H +A+ V FP+ + V R S
Sbjct: 191 GLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERV-LGPFPQQMLKKVDRHS 248
>At4g24740.1 68417.m03541 protein kinase (AFC2) identical to protein
kinase AFC2 [Arabidopsis thaliana] SWISS-PROT:P51567
Length = 427
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 525 GLGRSGQCAVQTAGRFRRRSCTGDTLVPGHTRNTPIALETTVEFMEFPRTVTSSVHRES 701
GLG S C V + G CTG+ L H +A+ V FP+ + V R S
Sbjct: 294 GLGWSYPCDVWSVGCIIVELCTGEALFQTHENLEHLAMMERV-LGPFPQQMLKKVDRHS 351
>At5g14620.1 68418.m01714 cytosine methyltransferase (DRM2)
identical to cytosine methyltransferase GI:7658293 from
[Arabidopsis thaliana]
Length = 626
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -1
Query: 549 HTDHSDQAPHR--PERHFDTEGSPRSS 475
+T+H +Q P +R F+++G PRSS
Sbjct: 244 YTEHEEQKPRHNIKKRRFESKGEPRSS 270
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 79 SPSAISVEAGSAASLRCSPPMAAPPPHISWLKHGAP 186
SP A A S+ PP PPP + LKH AP
Sbjct: 439 SPPPTPPIADIAISMPPPPPPPPPPPAVMPLKHFAP 474
>At1g22370.2 68414.m09509 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glycosyltransferase family
Length = 479
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 149 GAAIGGEQRREAAEPASTEIADGD 78
G IGG+ RRE E E+ DGD
Sbjct: 414 GMEIGGDVRREEVEELVRELMDGD 437
>At1g22370.1 68414.m09508 UDP-glucoronosyl/UDP-glucosyl transferase
family protein glycosyltransferase family
Length = 309
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 149 GAAIGGEQRREAAEPASTEIADGD 78
G IGG+ RRE E E+ DGD
Sbjct: 244 GMEIGGDVRREEVEELVRELMDGD 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,673,404
Number of Sequences: 28952
Number of extensions: 362245
Number of successful extensions: 1196
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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