Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0440
         (813 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1410 + 26363538-26363777,26365421-26365475,26365553-263656...    30   2.5  
03_06_0213 - 32406047-32406742                                         29   5.8  
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287...    28   7.7  
02_04_0224 - 21059328-21059888,21060388-21060462,21060715-210607...    28   7.7  

>07_03_1410 +
           26363538-26363777,26365421-26365475,26365553-26365644,
           26365732-26365787,26366026-26366101,26366790-26366856,
           26367197-26367263,26368276-26368342,26368759-26368842,
           26369749-26369904,26370641-26370718,26371323-26371391,
           26371476-26371541,26371623-26371751,26372862-26372951,
           26373306-26373371,26373768-26373836,26373903-26374007,
           26374374-26374499,26374687-26374745,26374832-26374868,
           26375370-26375519
          Length = 667

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 562 SKQSLFDLPVRPGAIKHLVFAIGEPCIGRCFLLDAIESAIYDVIFKNMGGY 714
           +K+++  LPV   A K++V   G P + R   L     A+Y  ++KN+  Y
Sbjct: 335 AKRTMHSLPVLQKA-KYVVLLSGTPALSRPIELFTQLQALYPTVYKNVNEY 384


>03_06_0213 - 32406047-32406742
          Length = 231

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -1

Query: 627 NSEDQVFDSTRSDRKIEQRLLAGFDVVESICVLQVIDD 514
           N  D +  S    RKI   L AG  V ES+ +LQ +DD
Sbjct: 41  NKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDD 78


>09_04_0593 -
           18825741-18826702,18826994-18827875,18828687-18828775,
           18828942-18829080,18829405-18829531,18829629-18829838
          Length = 802

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 658 LDAIESAIYDVIFKNMGGYDIADHGHTRPQDWRVEEFDSS 777
           +DAI S + D+  K    + I   G T+P  W + +FDS+
Sbjct: 155 IDAISSKMRDIGEKQ---FSIVASGDTKPNSWTLLDFDST 191


>02_04_0224 -
           21059328-21059888,21060388-21060462,21060715-21060798,
           21060866-21061183,21061511-21061722,21061766-21062030
          Length = 504

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 86  QITSFVQIFSGVCAGDGVNTRLSERRHV 3
           ++ S  ++F G  AGD V  R+ E  HV
Sbjct: 18  EVQSLAELFGGPGAGDAVEWRMPENHHV 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,234,659
Number of Sequences: 37544
Number of extensions: 506794
Number of successful extensions: 1377
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)