Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0440
         (813 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC098587-1|AAH98587.1| 1072|Homo sapiens FAM65A protein protein.       30   8.7  
BC054512-1|AAH54512.1|  941|Homo sapiens FAM65A protein protein.       30   8.7  
AK127792-1|BAC87139.1| 1223|Homo sapiens protein ( Homo sapiens ...    30   8.7  
AK023787-1|BAB14678.1|  858|Homo sapiens protein ( Homo sapiens ...    30   8.7  
AB067517-1|BAB67823.1|  664|Homo sapiens KIAA1930 protein protein.     30   8.7  

>BC098587-1|AAH98587.1| 1072|Homo sapiens FAM65A protein protein.
          Length = 1072

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 414 TPTYTSTTRNATITSPPSRLGMNPSTNT 497
           +PT+TST+   T TSP  +  M+P T T
Sbjct: 467 SPTHTSTSPTHTPTSPTHKTSMSPPTTT 494


>BC054512-1|AAH54512.1|  941|Homo sapiens FAM65A protein protein.
          Length = 941

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 414 TPTYTSTTRNATITSPPSRLGMNPSTNT 497
           +PT+TST+   T TSP  +  M+P T T
Sbjct: 336 SPTHTSTSPTHTPTSPTHKTSMSPPTTT 363


>AK127792-1|BAC87139.1| 1223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45893 fis, clone OCBBF3023543. ).
          Length = 1223

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 414 TPTYTSTTRNATITSPPSRLGMNPSTNT 497
           +PT+TST+   T TSP  +  M+P T T
Sbjct: 618 SPTHTSTSPTHTPTSPTHKTSMSPPTTT 645


>AK023787-1|BAB14678.1|  858|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13725 fis, clone PLACE3000009, weakly similar to
           DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (EC
           2.7.7.6). ).
          Length = 858

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 414 TPTYTSTTRNATITSPPSRLGMNPSTNT 497
           +PT+TST+   T TSP  +  M+P T T
Sbjct: 253 SPTHTSTSPTHTPTSPTHKTSMSPPTTT 280


>AB067517-1|BAB67823.1|  664|Homo sapiens KIAA1930 protein protein.
          Length = 664

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 414 TPTYTSTTRNATITSPPSRLGMNPSTNT 497
           +PT+TST+   T TSP  +  M+P T T
Sbjct: 60  SPTHTSTSPTHTPTSPTHKTSMSPPTTT 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,268,271
Number of Sequences: 237096
Number of extensions: 2695584
Number of successful extensions: 7082
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7078
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)