Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0439
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.43 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.43 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.0  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   9.3  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -3

Query: 655 TWYHQVAWATRKSWIFPLKVLFRKSANTKLSPKISASVL*FVTL 524
           TW   V     K W  P    F     T+  P I +++L FV L
Sbjct: 136 TWIRAVRKCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFVVL 179


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = -3

Query: 655 TWYHQVAWATRKSWIFPLKVLFRKSANTKLSPKISASVL*FVTL 524
           TW   V     K W  P    F     T+  P I +++L FV L
Sbjct: 136 TWIRAVRKCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFVVL 179


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = -1

Query: 405 IGIPHPALIPSFR*TAVHLQLYHLYFQQSIVHCYCLNINYFGLFL-HFYSHSATITSDQR 229
           IG+       SF    +H+++  ++F+++ ++C+    NY+ + +  FY         + 
Sbjct: 45  IGVVVSIYSKSFHRNEIHIKIVLMFFKEASLYCF----NYYVIVVTTFYKRRTWTRLLKN 100

Query: 228 KDNLCKPNKAYR*MHIY 178
            ++  K  K  R  + Y
Sbjct: 101 LESCAKIKKTKRYCYYY 117


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 318 CSVENISDKVEDEQRSNEMMVLVPGGEYQYGTDDIVI 428
           CS    S KV +E+   ++ +     E Q+G   ++I
Sbjct: 350 CSSAGCSQKVAEERHKTDINITTVPSEQQWGILVLII 386


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -3

Query: 670 PIGTNTWYHQVAWATRKSWIFPLKVLFRKSANTKLSPKISASVL 539
           P   + WY+   +   ++     K+ FR    T L PK+ A  L
Sbjct: 31  PSYCDPWYNPYYYQYLQNAALYHKLQFRGPPRTPLQPKLVAGKL 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,344
Number of Sequences: 336
Number of extensions: 3835
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)