Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0438
(808 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 49 7e-07
SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharom... 43 4e-05
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 42 1e-04
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 40 5e-04
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 38 0.002
SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein Rga5|Sch... 37 0.004
SPBC354.13 |rga6||GTPase activating protein Rga6|Schizosaccharom... 29 0.59
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.78
SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces po... 28 1.8
SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces p... 28 1.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 4.1
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 26 7.2
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 7.2
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.6
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 49.2 bits (112), Expect = 7e-07
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +2
Query: 17 GIPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFRD-----DPHI 181
G+P +V +C+E+L A + EGI+R S + T+K L+ N+G D H+
Sbjct: 1081 GLPIVVYRCIEYLESCRAEKEEGIYRLSGSASTIKHLKEQFNEGVDYDLLSSDEEFDVHV 1140
Query: 182 AAVLLKTFLRDLEEPVLTYDLYE 250
A LLK +LR+L +L +++
Sbjct: 1141 IAGLLKLYLRNLPTNLLDTSMHK 1163
Score = 35.9 bits (79), Expect = 0.007
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 310 ILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWP 453
++ +LP EN+ LL L L ++ +NKM N+ +VF P L P
Sbjct: 1184 VISKLPPENFALLDSLLHHLRRIIAFEKVNKMNIRNVCIVFSPTLNIP 1231
>SPBC3F6.05 |rga1||GTPase activating protein Rga1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1150
Score = 43.2 bits (97), Expect = 4e-05
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQG-EPISFRDDPHIA-AVL 193
IP + + + R D + G+FR++ N+ +K+L + + + I + + I A L
Sbjct: 861 IPAFIGNTLAAMKRKD-MSVVGVFRKNGNIRRLKELSDMLDVSPDSIDYEQETPIQLAAL 919
Query: 194 LKTFLRDLEEPVLTYDLY 247
LK FLR+L +P+LT+ L+
Sbjct: 920 LKKFLRELPDPLLTFKLF 937
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 41.9 bits (94), Expect = 1e-04
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +1
Query: 322 LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 444
LP NY +++L L K+K+ S +NKM+ +NLA+++GP +
Sbjct: 625 LPDANYSTIRHLTIHLAKIKENSDVNKMSTNNLAIIWGPTI 665
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGE------PISFRDDPHI 181
IP IV QC + L +GI+R ++ V L++ P + +D H
Sbjct: 519 IPNIVMQCTSQVEN-FGLNLQGIYRVPSSSARVNMLRSQFENNPLLQLHTPEDYENDVHA 577
Query: 182 AAVLLKTFLRDLEEPVL 232
A LLK F R+L EP++
Sbjct: 578 VADLLKIFFRELREPLI 594
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSC-NQGEPISFRDDPHIAAVLL 196
+P ++ C+ F+ ++ EG++R+S +K++ N+ + +D +
Sbjct: 760 VPTLIVSCINFIESY-GMDFEGLYRKSGATSQMKKIVALLRNEDTVLDPSEDISAVTSVF 818
Query: 197 KTFLRDLEEPVLTYDLY 247
K +LR+L P++TYD Y
Sbjct: 819 KQYLRNLPNPIITYDQY 835
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +1
Query: 304 ILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPP 456
I++++ LP + ++L+ + + L +V S N+MT NLAVVF P L P
Sbjct: 855 IMVIKSLPPAHAEILQLIIRHLARVAAYSHANRMTSKNLAVVFSPTLIRDP 905
>SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGE--PISFRDDPHIAAVL 193
+P ++ CV + LE EGI+R S + V+ L + G D +
Sbjct: 793 LPQVIAMCVSCVDA-HGLEVEGIYRISGSASQVRVLVDEFENGSIRMEHLTSDLFACTSV 851
Query: 194 LKTFLRDLEEPVLTYDLYEE 253
LKT+L L EPV+ YEE
Sbjct: 852 LKTYLHRLPEPVIPGTQYEE 871
>SPBC17F3.01c |rga5|SPBC557.01|GTPase activating protein
Rga5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 313 LERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQM 468
++ LPI N +LL YL L S N MT NLA +F P + P ++
Sbjct: 171 IDELPIPNRQLLLYLLDLLSVFAMNSSKNLMTADNLAAIFQPGILSHPDHEV 222
>SPBC354.13 |rga6||GTPase activating protein
Rga6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 733
Score = 29.5 bits (63), Expect = 0.59
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQL 127
+P I QCV FLS +AL GIFR S + +K +
Sbjct: 331 LPHIFAQCVHFLSL-NALHVPGIFRISGSGPVIKAI 365
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.78
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 430 TPRPGCCRSSCSDSFDPLPSTETGTSISTA 341
TP P SS S PLPST T + ST+
Sbjct: 315 TPPPPASTSSTGTSSSPLPSTSTSCTTSTS 344
>SPAC1565.02c |||GTPase activating protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 340 KLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLA 447
KL + +F L+++ N M NLA+ GP+ +
Sbjct: 283 KLARLIFSLLYQITQHEQENMMNAQNLALCIGPSFS 318
>SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 485
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -3
Query: 491 IGAIACRDIWPLGGQARLGPNTTARLLQVILFRQLRSFTFHRNWNKY 351
+ A+A RD WPLGG + + ++ S NWN Y
Sbjct: 307 LSAVAHRDAWPLGGFRGESDLDDEYIYESLVNYSRSSLPSAENWNVY 353
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -1
Query: 445 PGWDRTPRPGCCRSSCSDSFDPLPSTETGTSISTACSSQSEVFPGSVSS 299
P P P RSS S S P P T +S SQ E P S S
Sbjct: 738 PAVKHHPPPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPPQSYES 786
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -3
Query: 413 LQVILFRQLRS--FTFHRNWNKYFNSL*FSIGSLSRISIFTL 294
++V LF RS F HRNW +SL S S IS +TL
Sbjct: 17 VKVFLFPSYRSTDFEVHRNWLAITHSLPISEWYKSSISEWTL 58
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 394 DSFDPLPSTETGTSISTACSSQSEVFPGSVSSH 296
DSF PLP T S P SVSSH
Sbjct: 151 DSFRPLPETPVSPGGSLVHPLPRPPLPSSVSSH 183
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 9.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 138 ATKASQSRFAMTPISRPFYSRPSCVI 215
AT S S MTP++ F+S +CV+
Sbjct: 739 ATILSSSSTPMTPLNHHFFSLATCVL 764
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,963,673
Number of Sequences: 5004
Number of extensions: 57393
Number of successful extensions: 183
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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