Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0438
(808 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_31303| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0) 59 4e-09
SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0) 49 5e-06
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_718| Best HMM Match : RhoGAP (HMM E-Value=0) 48 7e-06
SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44) 48 1e-05
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 47 2e-05
SB_38980| Best HMM Match : RhoGAP (HMM E-Value=0) 46 4e-05
SB_12981| Best HMM Match : RhoGAP (HMM E-Value=0) 46 4e-05
SB_19750| Best HMM Match : RhoGAP (HMM E-Value=8.4e-34) 44 2e-04
SB_42987| Best HMM Match : RhoGAP (HMM E-Value=2.7e-26) 43 3e-04
SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0) 39 0.005
SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_42550| Best HMM Match : RhoGAP (HMM E-Value=0) 38 0.013
SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.039
SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16
SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_56469| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-12) 33 0.36
SB_21614| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-41) 33 0.36
SB_10952| Best HMM Match : Exo_endo_phos (HMM E-Value=4.1e-08) 33 0.36
SB_38448| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-12) 33 0.36
SB_10116| Best HMM Match : RVT_1 (HMM E-Value=2.5e-33) 33 0.36
SB_45260| Best HMM Match : RVT_1 (HMM E-Value=1.2) 31 0.83
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25) 30 1.9
SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34) 30 2.5
SB_49189| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_14370| Best HMM Match : MyTH4 (HMM E-Value=9.3e-25) 29 5.9
SB_29473| Best HMM Match : CASP_C (HMM E-Value=6.5) 29 5.9
SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_43333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 75.8 bits (178), Expect = 4e-14
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 TNVIDGIPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFRD--DP 175
TN + IP +R VEF+ + L+ EGIFRRSAN VKQ+ NQG P+ + + D
Sbjct: 265 TNNGEVIPRAIRTSVEFIQE-NGLDVEGIFRRSANSQMVKQVTVMFNQGTPVDYTELGDV 323
Query: 176 HIAAVLLKTFLRDLEEPVLTYDL 244
H AA ++K FLR+L EP+LTY+L
Sbjct: 324 HCAAAIIKKFLRELPEPLLTYEL 346
Score = 71.3 bits (167), Expect = 8e-13
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +1
Query: 319 RLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINA 498
RLP EN+ LLK++ +FL +V+ NKMT SNLA+VFGPNL W + SL A+A IN
Sbjct: 373 RLPAENFALLKFIMEFLQEVQQHPA-NKMTASNLAIVFGPNLIWGRTAASSLDAMAQINT 431
Query: 499 FT 504
FT
Sbjct: 432 FT 433
>SB_31303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 60.1 bits (139), Expect = 2e-09
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFRD--DPHIAAVL 193
+P +V C+E++ + LE EG+FR N + L+ N+GE D D H A L
Sbjct: 117 VPIVVDVCIEYIKKY-GLEEEGLFRLPGNAKHISTLKAQFNRGESPELSDEKDIHTVASL 175
Query: 194 LKTFLRDLEEPVLTYDLYE 250
LK +LR+L EPV+ YD +E
Sbjct: 176 LKLYLRELSEPVIPYDFFE 194
>SB_42552| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 945
Score = 59.3 bits (137), Expect = 4e-09
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFR--DDPHIAAVL 193
+P IV Q +E L L GIFR + +KQ++ + GE F D+PH A L
Sbjct: 406 VPTIVNQAIEHLENY-GLHVLGIFRTGGSKKRMKQMREQFDSGEKTQFNAEDNPHDVAAL 464
Query: 194 LKTFLRDLEEPVLTYDLY 247
K +LRDL EP+LT +LY
Sbjct: 465 FKEYLRDLPEPLLTRELY 482
>SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 583
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 283 EKPRNVKIL-ILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPS 459
EK R V I ++++LP +Y+ L+YL Q L KV + M NLA+V+ PNL P S
Sbjct: 110 EKERKVAIHHVVQQLPPPHYRTLEYLLQHLAKVASHAGQTAMHAKNLAIVWAPNLLKPRS 169
Query: 460 GQMSLQAIAPIN 495
+ A+ IN
Sbjct: 170 QEYGSTALLEIN 181
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFRD-----DPHIA 184
IP ++ +C + ++ GI+R S + +++L+ + EP D D H
Sbjct: 20 IPLVLEKCAAVIEEHGIVD--GIYRLSGSSSIIQKLRFLFDGDEPPELDDEYYLRDVHCI 77
Query: 185 AVLLKTFLRDLEEPVLTYDLYEE 253
+ LLK + R+L P+LTY LY++
Sbjct: 78 SSLLKMYFRELPNPLLTYSLYDK 100
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 48.4 bits (110), Expect = 7e-06
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +1
Query: 277 NAEKPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPP 456
+AE+ + +K LILE L + + ++LK L+ + D + +N MT NLAV P++ W P
Sbjct: 770 DAERAQQIK-LILENLSVYSIEILKRFLCVLYHIADNADVNNMTAYNLAVCVAPSMLWAP 828
Query: 457 SG 462
G
Sbjct: 829 KG 830
>SB_718| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 598
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +1
Query: 256 LKFQSWPNAEKPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFG 435
+K + +AE+ R + + LP N YLFQ L KV ++S ++KM +NL+ VFG
Sbjct: 426 VKAYAMADAEEKRETMLELFRSLPTPNRLTACYLFQHLRKVAEKSEVHKMGLNNLSTVFG 485
Query: 436 PNLAWP 453
PN+ P
Sbjct: 486 PNVLRP 491
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISF----RDDPHIAA 187
IP IV CV + + LE GI+R S VK+L+ ++ + D H A
Sbjct: 344 IPLIVIGCVREIEKR-GLEEVGIYRLSGASSDVKRLKEGFDENSQSALVLVSEADIHAVA 402
Query: 188 VLLKTFLRDLEEPVLTYDLYEE 253
L K +LRDL EP+ T +LY++
Sbjct: 403 GLFKMYLRDLPEPLFTDELYDK 424
>SB_45475| Best HMM Match : RhoGAP (HMM E-Value=1.26117e-44)
Length = 552
Score = 47.6 bits (108), Expect = 1e-05
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +2
Query: 5 NVIDGIPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFRDDPHIA 184
N +P + +FL + + TEG+FR+S ++ K L+ GE IS PH
Sbjct: 188 NYYCSVPKFLVDSAKFLRQH--MNTEGLFRKSGSVQRQKLLKERIELGEEIS-TAQPHDV 244
Query: 185 AVLLKTFLRDLEEPVLT---YDLYEETSNFNRGLTQRSRAM 298
A L+K F R L+EP+LT +D + +T T R++AM
Sbjct: 245 AGLMKQFFRQLQEPLLTNTYHDSFIKTMRIEDDNT-RTKAM 284
Score = 35.9 bits (79), Expect = 0.039
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 322 LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 444
LP+ + + LKY +FL + S +KM SNLA+V PNL
Sbjct: 291 LPLAHLQALKYTMKFLAEFASHSEKSKMGFSNLAIVLTPNL 331
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQG-EPISFRD-DPHIAAVL 193
+P IV C++ ++ L +GI+R S V++L + G E + PH+ A +
Sbjct: 262 VPYIVSSCIKEINNR-GLHVKGIYRVSGVKSRVEKLCQAFENGAELVDLSTVPPHVIAAV 320
Query: 194 LKTFLRDLEEPVLTYDLYEE 253
LK +LR L EP+LT+ LY E
Sbjct: 321 LKLYLRQLPEPLLTFKLYPE 340
Score = 34.7 bits (76), Expect = 0.089
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 319 RLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINA 498
+LP N+K + + L V N M+ SNL +VFGP L P S ++A
Sbjct: 384 KLPKANFKTAAKIIEHLHLVAANEDENSMSGSNLGIVFGPTLLRPRESASS--DSVNMSA 441
Query: 499 FTDSPWRTK 525
D P +T+
Sbjct: 442 LMDMPLQTR 450
>SB_38980| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 367
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +1
Query: 310 ILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPN 441
+L++LP NY+LLK+L FL +V NKM+ LA+VFGPN
Sbjct: 291 LLDKLPYLNYELLKFLCHFLVEVSMNEENNKMSTMALAIVFGPN 334
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFRD-DPHIAAVLL 196
IP ++ + V +LS+ L+ EGIFR S N V+ L+ + ++ + D A LL
Sbjct: 192 IPWVLAKIVHYLSQC-GLKHEGIFRVSGNHKVVESLKATFDRDGDADLEECDVMAVAGLL 250
Query: 197 KTFLRDLEEP 226
K FLR+L EP
Sbjct: 251 KLFLRELPEP 260
>SB_12981| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 251
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFR----DDPHIAA 187
IP V +C+ + LE +GI+R N+ V++++ +Q EPI+ DD H A
Sbjct: 53 IPIFVSKCINAIESR-GLEFDGIYRVCGNVALVQRIRIMVDQEEPIALGESPFDDVHALA 111
Query: 188 VLLKTFLRDLEEPVLTYDLY 247
LK + R++ EP++ +D +
Sbjct: 112 GSLKLYFREMPEPLVPFDFF 131
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +1
Query: 259 KFQSWPNAEKPRNVKILILE----RLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAV 426
+F + + RN K+ L+ +LP N+ LK L L KV S +N+M NLA+
Sbjct: 153 RFYRLSSEQSTRNSKLGALKSLVGQLPRINFDTLKLLLGHLHKVMGFSEVNRMHAQNLAI 212
Query: 427 VFGPNLAWP 453
V+GPN+ P
Sbjct: 213 VWGPNMMRP 221
>SB_19750| Best HMM Match : RhoGAP (HMM E-Value=8.4e-34)
Length = 128
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISF----RDDPHIAA 187
IP IV CV + + LE GI+R S VK+L+ ++ + D H A
Sbjct: 7 IPLIVIGCVREIEKR-GLEEVGIYRLSGASSDVKRLKEGFDENSQSALVLVSEADIHAVA 65
Query: 188 VLLKTFLRDLEEPVLTYDLYEE 253
L K +LRDL EP+ T +LY++
Sbjct: 66 GLFKMYLRDLPEPLFTDELYDK 87
>SB_42987| Best HMM Match : RhoGAP (HMM E-Value=2.7e-26)
Length = 139
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1
Query: 313 LERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAWPPSG 462
L LP +Y+ +K+L L +V R N MT NL++VFGP L P G
Sbjct: 60 LGELPQAHYETMKFLMGHLHRVSQRRSKNMMTEENLSIVFGPTLMRAPEG 109
>SB_4894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEPISFRD-DPHIAAVLL 196
+P + R+ + ++ + L EGI+R S V L+ +QG+ + ++ +P + A ++
Sbjct: 118 LPRLFREGIMYVEE-NGLNVEGIYRVSGVKSKVDALKELYDQGKQVDLKEYEPEVVASIV 176
Query: 197 KTFLRDLEEPVLT 235
K +LR+L E VLT
Sbjct: 177 KQYLRELPESVLT 189
>SB_36803| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1277
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQGEP---ISFRDDPHIAAV 190
+P +VR+CV + + LE+ G++R S N K+L+ ++ IS + P I +
Sbjct: 944 VPLLVRKCVLEIEKR-GLESVGLYRISGNARRKKELRGFFDENSEAVDISEENCPDINVI 1002
Query: 191 --LLKTFLRDLEEPVLTYDLYE 250
+LK +LR+L EP++T + E
Sbjct: 1003 TGILKDYLRELPEPLITEKMTE 1024
>SB_19709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 352 YLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAW 450
YL FL K+ D S +NKMT SN+A+V PN+ +
Sbjct: 393 YLICFLGKLADYSEVNKMTASNIAIVIAPNIIY 425
Score = 32.3 bits (70), Expect = 0.48
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 161 FRDDPHIAAVLLKTFLRDLEEPVLTYDLYEE 253
F D H +LK +LR+L EP++T+ LY++
Sbjct: 300 FDCDVHAITGVLKQYLRELPEPLMTFALYDD 330
>SB_42550| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 790
Score = 37.5 bits (83), Expect = 0.013
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 20 IPPIVRQCVEFLSRPDALETEGIFRRSANMVTVKQLQNSCNQG-EPISFRD-DPHIAAVL 193
+P + + +L R +E+ GIFR+S + L++ E F P+ A +
Sbjct: 316 LPRPILCAINYLQRT-CVESVGIFRKSGGKQRINNLKDMMEDNPEHTDFEGMSPYDLADM 374
Query: 194 LKTFLRDLEEPVLTYDLYE 250
LK + RDL +P+LT L E
Sbjct: 375 LKQYFRDLPDPILTSKLAE 393
Score = 34.7 bits (76), Expect = 0.089
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +1
Query: 322 LPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 444
+P EN + L+ L FL +V + S +N+M NL V F P+L
Sbjct: 418 MPDENREALQTLLLFLNEVAENSAVNQMNEKNLGVCFAPSL 458
>SB_40773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 35.9 bits (79), Expect = 0.039
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 277 NAEKPRNVKILILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNLAW 450
NA+ +++L L +P EN LL L + L V + NKMT NLAVVF PN+ +
Sbjct: 148 NAKHVEALQLLFL-MIPPENRSLLHNLLELLKLVLENPN-NKMTAYNLAVVFCPNVLY 203
>SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 71 LETEGIFRRSANMVTVKQLQNSCNQGEPISF---RDDPHIAAVLLKTFLRDLEEPVLTYD 241
++ EGI+R+S + ++ +QNS ++ F + H LK FL+ L EP++ +
Sbjct: 287 MQIEGIYRKSGKIEDIRTIQNSFDEKRDADFSALEMNVHAVTGALKKFLKLLPEPLIPNN 346
Query: 242 L 244
L
Sbjct: 347 L 347
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 310 ILERLPIENYKLLKYLFQFLWKVKDRSCLNKMTCSNLAVVFGPNL 444
++ +LP N+ +LKYL L +V + S N M NLA V P +
Sbjct: 459 LVMQLPKVNFAVLKYLMCHLNRVTEYSKENLMESRNLATVIFPTI 503
>SB_10519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 33.5 bits (73), Expect = 0.21
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 373 KVKDRSCLNKMTCSNLAVVFGPNLAWPPSGQMSLQAIAPINAFTD 507
+V + S NKM NLAVVFGP L PS Q + + +N +
Sbjct: 637 RVSEHSEQNKMDAHNLAVVFGPTLLRIPSEQDMITYQSHVNGMME 681
>SB_56469| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-12)
Length = 652
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 2 TNVIDGIPPIVRQCV---EFLSRPDALETEGI-FRRSANMVTVKQLQNSCNQGE 151
T ++DG+PP+ C+ FLS+P + G+ F N+V K+ + C++ E
Sbjct: 328 TKILDGLPPLTNTCMTGYNFLSQPTLSDAGGVGFYIKNNLVYSKRDEFCCSKPE 381
>SB_21614| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-41)
Length = 1047
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 2 TNVIDGIPPIVRQCV---EFLSRPDALETEGI-FRRSANMVTVKQLQNSCNQGE 151
T ++DG+PP+ C+ FLS+P + G+ F N+V K+ + C++ E
Sbjct: 338 TKILDGLPPLTNTCMTGYNFLSQPTLSDVGGVGFYIKNNLVYSKRDEFCCSKPE 391
>SB_10952| Best HMM Match : Exo_endo_phos (HMM E-Value=4.1e-08)
Length = 558
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 2 TNVIDGIPPIVRQCV---EFLSRPDALETEGI-FRRSANMVTVKQLQNSCNQGE 151
T ++DG+PP+ C+ FLS+P + G+ F N+V K+ + C++ E
Sbjct: 84 TKILDGLPPLTNTCMTGYNFLSQPTLSDVGGVGFYIKNNLVYSKRDEFCCSKPE 137
>SB_38448| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-12)
Length = 343
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 2 TNVIDGIPPIVRQCV---EFLSRPDALETEGI-FRRSANMVTVKQLQNSCNQGE 151
T ++DG+PP+ C+ FLS+P + G+ F N+V K+ + C++ E
Sbjct: 84 TKILDGLPPLTNTCMTGYNFLSQPTLSDAGGVGFYIKNNLVYSKRDEFCCSKPE 137
>SB_10116| Best HMM Match : RVT_1 (HMM E-Value=2.5e-33)
Length = 759
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 2 TNVIDGIPPIVRQCV---EFLSRPDALETEGI-FRRSANMVTVKQLQNSCNQGE 151
T ++DG+PP+ C+ FLS+P + G+ F N+V K+ + C++ E
Sbjct: 60 TKILDGLPPLTNTCMTGYNFLSQPTLSDAGGVGFYIKNNLVYSKRDEFCCSKPE 113
>SB_45260| Best HMM Match : RVT_1 (HMM E-Value=1.2)
Length = 584
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 491 STLSPTHPGEPRVDLHHLNISDLILSRY 574
+TLS G+P++DL LN+S + L+RY
Sbjct: 261 NTLSGRSKGDPKMDLSSLNLSSVTLNRY 288
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 31.5 bits (68), Expect = 0.83
Identities = 27/96 (28%), Positives = 39/96 (40%)
Frame = +3
Query: 171 TPISRPFYSRPSCVISRSPC*PTTCTRKPQISIVA*RREAAQCEDTDPGKTSD*ELQAVE 350
TPI P Y+ P IS SP T P S ++ ++ + E T P K + A E
Sbjct: 131 TPIPTPVYTPPESEISESPDALVTPALTPSQSSMSQEMDSMETEPTPPPKEMPPQ-PAEE 189
Query: 351 ILVPVSVEGKGSKLSEQDDLQQPGRGVRSQPGLAPQ 458
P GS+ + + L++P P PQ
Sbjct: 190 SRTP-----PGSRSTPEPSLEEPEVSAMGTPVSTPQ 220
>SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25)
Length = 252
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Frame = +2
Query: 83 GIFRR-SANMVTVKQLQNSCNQ--GEPISFRD----DPHIAAVLLKTFLRDLEEPVLTYD 241
G RR N V L N+ E I+F++ D + LLK FLR L E ++T +
Sbjct: 2 GCVRRVPGNSAAVGALSEELNEKGAENINFQEEKWHDVNNITSLLKQFLRKLPEGLVTAE 61
Query: 242 LYEETSNFNR 271
LYE NR
Sbjct: 62 LYESFIEANR 71
>SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34)
Length = 686
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 219 SRSRRKVLSRTAAIW-GSSRNEIGSPW 142
S + V++ T IW GSSRN G PW
Sbjct: 215 SHRQEYVMNETGRIWVGSSRNNYGRPW 241
>SB_49189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1373
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 512 GESVKALIGAIACRDIWPLGGQAR--LGPNTTARLLQVILFRQLRSFTFHRNWNKYFNSL 339
GE + L+G+IA ++ G+A LG N +L V F R + HRN FN++
Sbjct: 142 GELLPGLVGSIA-NFVFEAAGEAMKFLGENAWLLILAVTAFLVRRMQSNHRNKRAVFNTM 200
>SB_14370| Best HMM Match : MyTH4 (HMM E-Value=9.3e-25)
Length = 618
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/41 (24%), Positives = 24/41 (58%)
Frame = +1
Query: 235 LRPVRGNLKFQSWPNAEKPRNVKILILERLPIENYKLLKYL 357
+ P RG L + P+A PR++ + + EN+++++++
Sbjct: 423 ISPYRGELIRYNCPSAGLPRDIDAFLFSKFADENFQVMRFM 463
>SB_29473| Best HMM Match : CASP_C (HMM E-Value=6.5)
Length = 389
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 190 STQDLPA*SRGARVDLRPVRGNLKFQSWPNAEKPRNVKILILERL 324
STQDL + + +PV G+ + Q P++ PR+ + +LERL
Sbjct: 99 STQDLVKQAMADSRNRKPVAGDRREQRAPDSPLPRHKDLGLLERL 143
>SB_58663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 369 QKLEQVFQQLVVLNRKSFQDQYLHIARLLCVR 274
+KLE ++LV L + F++ H A L+C+R
Sbjct: 291 KKLETANEELVKLRGEMFENSQKHSAELICLR 322
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,859,990
Number of Sequences: 59808
Number of extensions: 467530
Number of successful extensions: 1556
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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