Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0437
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    87   4e-16
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    46   7e-04
UniRef50_Q98S91 Cluster: Putative uncharacterized protein orf744...    33   6.7  
UniRef50_P75566 Cluster: Uncharacterized protein MPN103; n=1; My...    33   8.8  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 87.0 bits (206), Expect = 4e-16
 Identities = 42/59 (71%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
 Frame = +2

Query: 200 FLFIIDDPADFVVPQSINKE-LNFCKINLK*TKGIRPTGDISNGKQNCYFYLIPSIFVF 373
           F+ I+ DPADFVVPQSINK   +  KINLK TKGIR TGD S  KQNCYFYLIP IF+F
Sbjct: 18  FMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFYLIPRIFIF 76


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 22/26 (84%), Positives = 22/26 (84%)
 Frame = -3

Query: 459 LKLENGWTDLVNSGLELFVEVQRRLK 382
           LKLENGWTDL N GLEL VEVQR LK
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_Q98S91 Cluster: Putative uncharacterized protein orf744;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf744 - Guillardia theta (Cryptomonas phi)
          Length = 744

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +2

Query: 188 KFDCFLFIIDDPADFVVPQSINKELNFCKI-NLK*TKGIRPTGDISNGKQNCYFYLIPSI 364
           K + ++  ID   +F+  + I++E+N+ K  NLK  K +      +      +F+ I  I
Sbjct: 584 KDNSYILCIDKDFNFLALKEISREINYIKKKNLKFVKFV--IQKFNENSWGDWFFKIFEI 641

Query: 365 FVFNYLFNLLW 397
           F+    +NLLW
Sbjct: 642 FIITQNYNLLW 652


>UniRef50_P75566 Cluster: Uncharacterized protein MPN103; n=1;
           Mycoplasma pneumoniae|Rep: Uncharacterized protein
           MPN103 - Mycoplasma pneumoniae
          Length = 172

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +2

Query: 548 YALRVVGNPPLTPKAWPTSSARTIYNTRHLSL*LKVRFIWYHIH 679
           + +R++GN  L    W T + R+I+NTR L     +RF++ + +
Sbjct: 49  WCIRIIGNRWLFRSFWSTGTLRSIFNTRILWFFRSLRFLFNYFN 92


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,637,222
Number of Sequences: 1657284
Number of extensions: 10327132
Number of successful extensions: 19575
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19571
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)