Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0437
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1320 - 35693575-35694846                                         32   0.38 
03_06_0013 - 31007580-31007657,31007795-31007876,31007963-310080...    25   9.5  

>02_05_1320 - 35693575-35694846
          Length = 423

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = -1

Query: 329 FRLICPPSDGFLLFILSLFYKSLVLYLSIEALQSLPGHL 213
           FR++ PPSD  L  +LS ++ + +   +I+A ++LP  L
Sbjct: 138 FRIVTPPSDRALSALLSAYHDNRLYDRAIQAFRTLPAEL 176


>03_06_0013 -
           31007580-31007657,31007795-31007876,31007963-31008065,
           31008156-31008315,31009016-31009207,31009880-31010194
          Length = 309

 Score = 25.0 bits (52), Expect(2) = 9.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 317 CPPSDGFLLFILSLFYKSLVLYLSIEALQSL 225
           C P   F   +LSLF KS +L+L +  +  L
Sbjct: 109 CMPDRAFSWNVLSLFTKSGMLFLEVSLIAFL 139



 Score = 21.0 bits (42), Expect(2) = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 434 IWLILVLNYLW 402
           +W + VLN LW
Sbjct: 91  LWAVAVLNLLW 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,742,856
Number of Sequences: 37544
Number of extensions: 257384
Number of successful extensions: 390
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)