Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0437
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z29094-12|CAA82340.2|  313|Caenorhabditis elegans Hypothetical p...    28   7.3  
AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical ...    28   7.3  

>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 344  NNNFVFRLICPPSDGFLLFILSL 276
            N++F+  L+CPPS  F  F+L L
Sbjct: 1644 NSDFIPLLVCPPSQEFYEFLLRL 1666


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 344  NNNFVFRLICPPSDGFLLFILSL 276
            N++F+  L+CPPS  F  F+L L
Sbjct: 1644 NSDFIPLLVCPPSQEFYEFLLRL 1666


>Z29094-12|CAA82340.2|  313|Caenorhabditis elegans Hypothetical
           protein C07A9.1 protein.
          Length = 313

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 230 FVVPQSINKELNFCKINLK*TKGIRPTGDISN 325
           F  P +    + FC++N+K T  +RPT  I N
Sbjct: 36  FRTPLNFTNAVRFCRVNMKSTL-VRPTSSIRN 66


>AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical
           protein Y51A2D.12 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/30 (43%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
 Frame = +2

Query: 314 DISNGKQNCYFYLIPS-IFV--FNYLFNLL 394
           D + G+ N Y++L+P+ IF+  FN +FN+L
Sbjct: 173 DTTYGRSNIYYFLMPALIFLTCFNIVFNVL 202


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,560,621
Number of Sequences: 27780
Number of extensions: 251189
Number of successful extensions: 518
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)