Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0434
         (876 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BZ50 Cluster: Chromosome undetermined scaffold_138, w...    34   4.1  
UniRef50_A0EIK4 Cluster: Chromosome undetermined scaffold_99, wh...    33   7.2  

>UniRef50_A0BZ50 Cluster: Chromosome undetermined scaffold_138, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_138, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 4267

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 373  YGN-ETSTKISCHCDVIWPQNMAALVLYKRFQCYQVLSINVLAHFILNIVE 224
            YG+ E    + C C+V+ P+ +   V+Y+  Q  +  SIN  AHFI   VE
Sbjct: 3827 YGDIENDLYLDCKCEVVAPKEVMLAVIYQNLQ--KSGSINAKAHFIPQSVE 3875


>UniRef50_A0EIK4 Cluster: Chromosome undetermined scaffold_99, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_99,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 675

 Score = 33.5 bits (73), Expect = 7.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 498 VCKNVPLKFWRECDERSCQNCFIVNLMLYSYLM 400
           VC  +  K+WR+    SC  CF  N + Y  ++
Sbjct: 148 VCNTIKRKYWRQAQSPSCDQCFCGNQLHYKQIV 180


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,878,349
Number of Sequences: 1657284
Number of extensions: 16573970
Number of successful extensions: 29176
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29175
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)