Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0434
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69716-1|CAA93526.1|  486|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical p...    28   7.6  
Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z69716-1|CAA93526.1|  486|Caenorhabditis elegans Hypothetical
           protein C04B4.1 protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 687 EPIRFSPIKKCSTELNRRLRNATSHA*RLRQSLPFKILYF*K 562
           +PI+  P++K  T+ N        ++  + Q+LPF +L F K
Sbjct: 28  KPIQLDPLEKLKTQFNTTTSKVIPNSSYVSQALPFVLLSFGK 69


>Z48009-12|CAA88089.1| 1137|Caenorhabditis elegans Hypothetical
           protein AH6.1 protein.
          Length = 1137

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 16  FELRHIFMFCDKRQLYKISVATFKNQLRLLGKFEGRTCL 132
           F + + FMFC  R + K      K  LRL G     TCL
Sbjct: 653 FSMDYFFMFCIIRDVAKGLEYLHKTFLRLHGNLRSATCL 691


>Z48007-3|CAA88054.1| 1137|Caenorhabditis elegans Hypothetical
           protein AH6.1 protein.
          Length = 1137

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 16  FELRHIFMFCDKRQLYKISVATFKNQLRLLGKFEGRTCL 132
           F + + FMFC  R + K      K  LRL G     TCL
Sbjct: 653 FSMDYFFMFCIIRDVAKGLEYLHKTFLRLHGNLRSATCL 691


>Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical
           protein R134.2 protein.
          Length = 1118

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +1

Query: 16  FELRHIFMFCDKRQLYKISVATFKNQLRLLGKFEGRTCL 132
           F + + FMFC  R + K      K  LRL G     TCL
Sbjct: 654 FSMDYFFMFCIIRDVAKGLEYLHKTFLRLHGNLRSATCL 692


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,697,229
Number of Sequences: 27780
Number of extensions: 414544
Number of successful extensions: 765
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)