Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0432
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 140 1e-33
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 115 5e-26
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 115 5e-26
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 115 5e-26
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 115 5e-26
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 115 5e-26
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 115 5e-26
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 115 5e-26
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 115 5e-26
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 115 5e-26
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 115 5e-26
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 114 7e-26
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 88 9e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 85 8e-17
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 67 2e-11
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 62 6e-10
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 62 6e-10
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 62 6e-10
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 62 6e-10
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 32 0.60
Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical pr... 32 0.60
Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical pr... 32 0.60
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 29 4.2
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 29 4.2
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 29 5.6
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 29 5.6
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 5.6
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 5.6
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 5.6
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 5.6
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 5.6
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 5.6
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 5.6
U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein. 29 5.6
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 29 5.6
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 9.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 9.8
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 140 bits (339), Expect = 1e-33
Identities = 61/83 (73%), Positives = 72/83 (86%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
E +R L SI+YPMEHGIV +W+DMEKIW YI+ +DQL F EEHPVLLT+APLNP +NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
+SAEIFFETFNVPAL++ MQAVL
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVL 144
Score = 109 bits (261), Expect = 3e-24
Identities = 59/105 (56%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYATGRTTG VLDSGDGVTHAVPI +GFAM H+I R+D+AGRDVT+YLR+LLR+EG
Sbjct: 145 SLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Query: 689 RTSAELEI-RQVYQGAGRAXCLPKPSXXKRPWRMKXAXYVLPDXT 820
S E EI R++ + A C K + Y LPD T
Sbjct: 205 HRSNEFEIVREMKENA----CYLALDPTKVENNSVKSSYALPDTT 245
Score = 99.5 bits (237), Expect = 3e-21
Identities = 44/60 (73%), Positives = 52/60 (86%)
Frame = +1
Query: 88 DVIVNQPVVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
DVI NQPVVIDNGSGVIKAGFAG+Q PK RF N++GRPK+ RVMAG L+G+IF+GP +S
Sbjct: 4 DVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 646 GDVTPGHVDSHDAVRHREPLVYGDGVRHSIAGVQYSTRGTT 524
G T +DS D V H P+V G ++H+I + + R T
Sbjct: 150 GRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVL 141
Score = 102 bits (244), Expect = 4e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 202 TTTAEREI 209
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVL 141
Score = 101 bits (243), Expect = 5e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 202 TTTAEREI 209
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVL 141
Score = 102 bits (244), Expect = 4e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 202 TTTAEREI 209
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVL 141
Score = 102 bits (244), Expect = 4e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 202 TTTAEREI 209
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVL 141
Score = 102 bits (244), Expect = 4e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 202 TTTAEREI 209
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVL 141
Score = 101 bits (243), Expect = 5e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 142 SLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 202 TTTAEREI 209
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+++DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVL 141
Score = 102 bits (244), Expect = 4e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 202 TTTAEREI 209
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 16 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 74
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 75 KMTQIMFETFNTPAMYVAIQAVL 97
Score = 102 bits (244), Expect = 4e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 98 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 157
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 158 TTTAEREI 165
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 46 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 104
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 105 KMTQIMFETFNTPAMYVAIQAVL 127
Score = 102 bits (244), Expect = 4e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 128 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 187
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 188 TTTAEREI 195
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 139 KAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+AGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 47
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 115 bits (276), Expect = 5e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVL 141
Score = 102 bits (244), Expect = 4e-22
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G +
Sbjct: 142 SLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 201
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 202 TTTAEREI 209
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 114 bits (275), Expect = 7e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNRE 440
+ R +L++KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NRE
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKSNRE 117
Query: 441 KSAEIFFETFNVPALFLSMQAVL 509
K +I FETFN PA+++++QAVL
Sbjct: 118 KMTQIMFETFNTPAMYVNIQAVL 140
Score = 98.7 bits (235), Expect = 5e-21
Identities = 43/68 (63%), Positives = 55/68 (80%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
SLYA+GRTTG VLD+GDGVTH VPIYEG+A+PH+I R+D+AGRD+T Y+ +L + G
Sbjct: 141 SLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTF 200
Query: 689 RTSAELEI 712
T+AE EI
Sbjct: 201 TTTAEREI 208
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 87.8 bits (208), Expect = 9e-18
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
+LYA G TG V+DSGDGVTH P+YEGFA+ H R+D+AGRD+TKYL LL + G N
Sbjct: 145 TLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
Query: 689 RTSAELE-IRQV 721
SA+ E +RQ+
Sbjct: 205 NHSADFETVRQM 216
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +3
Query: 270 RXLLSIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSA 449
R +L I YPM++GIV +W+DM +W++ + ++L +E +LLTE PLNP NREK
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 450 EIFFETFNVPALFLSMQAVLVCMQQ 524
++ FE + ++++++QAVL Q
Sbjct: 125 QVMFEQYGFNSIYVAVQAVLTLYAQ 149
Score = 41.9 bits (94), Expect = 6e-04
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRP 201
+V+DNG+G +K G+AG P FP+ +GRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 84.6 bits (200), Expect = 8e-17
Identities = 40/76 (52%), Positives = 52/76 (68%)
Frame = +3
Query: 282 SIKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFF 461
++KYP+ HGIV DW+ ME+ W K L E+H LLTE PLN NRE +AEI F
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFK-YLRAEPEDHFFLLTEPPLNTPENREYTAEIMF 138
Query: 462 ETFNVPALFLSMQAVL 509
E+FNVP L++++QAVL
Sbjct: 139 ESFNVPGLYIAVQAVL 154
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +2
Query: 467 IQCTGIISFNAGRSSLYATGRT-TGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDV 643
I +++ A +S A R+ TG V+DSGDGVTH +P+ +G+ + I + +AGRD+
Sbjct: 148 IAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDI 207
Query: 644 TKYLRLLLRKEGVNLRTSAELEIRQV 721
T +++ LLR + E+ ++
Sbjct: 208 TYFIQSLLRDREHTIPAEQSYEVAKM 233
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 112 VIDNGSGVIKAGFAGDQIPKCRFPNYI 192
VIDNG+G K G+AG+ P+ P+ I
Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/76 (46%), Positives = 42/76 (55%)
Frame = +3
Query: 297 MEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNV 476
M+ G++ DW EKI + Y S SE HPVL +E+ N R REK EI FE F V
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSE-HPVLFSESSWNDRARREKLTEIMFEKFQV 152
Query: 477 PALFLSMQAVLVCMQQ 524
PA +LS VL C Q
Sbjct: 153 PAYYLSKNVVLSCFAQ 168
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/60 (31%), Positives = 40/60 (66%)
Frame = +2
Query: 509 SLYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 688
S +A GRT G ++DSG T VP+++G+A+ H++++ + G +T+ L +L ++ +++
Sbjct: 164 SCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDV 223
Score = 31.5 bits (68), Expect = 0.79
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYI 192
+V D GS + GFAG++ PK P+YI
Sbjct: 14 LVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKI 341
+ R +L++KYP+EHGIVT+W+DMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKI 341
+ R +L++KYP+EHGIVT+W+DMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDM 332
+ R +L++KYP+EHGIVT+W+DM
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDM 83
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 109 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPVQKS 267
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +3
Query: 261 EEHRXLLSIKYPMEHGIVTDWNDMEKI 341
+ R +L++KYP+EHGIVT+W+DMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.60
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 318 DWNDMEKIWNYIYSKDQLSTFSEE 389
D D+++ W+Y+Y KD + FS+E
Sbjct: 315 DIADVDRFWDYLYEKDDIQKFSDE 338
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.60
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 318 DWNDMEKIWNYIYSKDQLSTFSEE 389
D D+++ W+Y+Y KD + FS+E
Sbjct: 315 DIADVDRFWDYLYEKDDIQKFSDE 338
>Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 345 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 506
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 272 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 323
>Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 345 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 506
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 236 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 287
>Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 345 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 506
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 272 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 323
>Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 345 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 506
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 236 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 287
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -3
Query: 666 SRSLRYLVTSRPATSTLMMLCGIANPSYMGTACVTPSPESSTAPVV 529
S S L +S P ST NPS G++ TP+P ST+PVV
Sbjct: 1246 SSSATSLSSSSPVPSTSQS----PNPSTSGSSTPTPNPSQSTSPVV 1287
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 512 LYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLL 667
LYA TTG V+D G+ V + VP+ +G+ + +I + + + LR L
Sbjct: 315 LYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASL 365
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 542 VLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLR 658
V+DSG T G + S++R+DV G+ +T L+
Sbjct: 147 VVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLK 185
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +3
Query: 294 PMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFN 473
P+E G V +W+ ++IW + + + + LT+ + S+EI F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTFGSMDVEASTSR--IALTDNNYLIPALPDVSSEILFDYFG 119
Query: 474 VPALFLSMQAVLV 512
+ + + LV
Sbjct: 120 FTEVHKTSASTLV 132
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 542 VLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLR 658
V+DSG T G + S++R+DV G+ +T L+
Sbjct: 147 VVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLK 185
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = +3
Query: 294 PMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFN 473
P+E G V +W+ ++IW + + + + LT+ + S+EI F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTFGSMDVEASTSR--IALTDNNYLIPALPDVSSEILFDYFG 119
Query: 474 VPALFLSMQAVLV 512
+ + + LV
Sbjct: 120 FTEVHKTSASTLV 132
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 690 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 749
Query: 335 KD 340
+D
Sbjct: 750 ED 751
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 800 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 859
Query: 335 KD 340
+D
Sbjct: 860 ED 861
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 1704 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 1763
Query: 335 KD 340
+D
Sbjct: 1764 ED 1765
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 1704 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 1763
Query: 335 KD 340
+D
Sbjct: 1764 ED 1765
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 1710 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 1769
Query: 335 KD 340
+D
Sbjct: 1770 ED 1771
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 1710 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 1769
Query: 335 KD 340
+D
Sbjct: 1770 ED 1771
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 1704 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 1763
Query: 335 KD 340
+D
Sbjct: 1764 ED 1765
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 1710 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 1769
Query: 335 KD 340
+D
Sbjct: 1770 ED 1771
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 1710 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 1769
Query: 335 KD 340
+D
Sbjct: 1770 ED 1771
>U21732-1|AAA85853.1| 970|Caenorhabditis elegans UNC-44 protein.
Length = 970
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 807 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 866
Query: 335 KD 340
+D
Sbjct: 867 ED 868
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 170 NVVSRTILVVRSTQE*WQE--R*KARSSLVPCRRA---SRPSQHQIPNGTRNSYRLERHG 334
N+V RT+ + Q+ W+E R SS P +R+ + + Q+P S E H
Sbjct: 880 NIVDRTVPLNEDEQQKWEELNRLADESSPSPAQRSTIVAESTSEQVPEDVEQSVESESHR 939
Query: 335 KD 340
+D
Sbjct: 940 ED 941
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -2
Query: 640 VTPGHVDSHDAVRHREPLVYGDGVRHSIAGVQYSTRGTTCCIQTRTACIERNNAG 476
V GH D HD E L G+ GV+ T CIQ C ++ G
Sbjct: 2892 VCDGHNDCHDEQVSDESLATCPGLPIDCRGVKVRCPNTNICIQPADLCDGYDDCG 2946
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -2
Query: 640 VTPGHVDSHDAVRHREPLVYGDGVRHSIAGVQYSTRGTTCCIQTRTACIERNNAG 476
V GH D HD E L G+ GV+ T CIQ C ++ G
Sbjct: 2892 VCDGHNDCHDEQVSDESLATCPGLPIDCRGVKVRCPNTNICIQPADLCDGYDDCG 2946
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,010,065
Number of Sequences: 27780
Number of extensions: 411150
Number of successful extensions: 1281
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -