Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0431
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    29   0.032
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   4.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   6.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.5  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   8.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.6  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   8.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.6  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 0.032
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -3

Query: 493 VTSFLCIGLESRFXLPLILAFPEHFKNTASSSMVRITVSYACLS 362
           V  F+    + R  +PLI+ FP  +K      +V   +++AC+S
Sbjct: 134 VAMFIVPYFQDRREMPLIVWFPFDYKQPVVFDLVYFILAFACIS 177


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/35 (17%), Positives = 21/35 (60%)
 Frame = -3

Query: 481 LCIGLESRFXLPLILAFPEHFKNTASSSMVRITVS 377
           +C+G+     +P+++   +  +N+ +  +V ++V+
Sbjct: 79  MCLGVIGNVMVPIVIFKTKDMRNSTNIFLVNLSVA 113


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/35 (17%), Positives = 21/35 (60%)
 Frame = -3

Query: 481 LCIGLESRFXLPLILAFPEHFKNTASSSMVRITVS 377
           +C+G+     +P+++   +  +N+ +  +V ++V+
Sbjct: 79  MCLGVIGNVMVPIVIFKTKDMRNSTNIFLVNLSVA 113


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 222 PMKVNQTVPTEGVAAAEADR 163
           P   N TVPT+GVA     R
Sbjct: 329 PYVRNTTVPTQGVARMSRGR 348


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 222 PMKVNQTVPTEGVAAAEADR 163
           P   N TVPT+GVA     R
Sbjct: 277 PYVRNTTVPTQGVARMSRGR 296


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 222 PMKVNQTVPTEGVA 181
           P   N TVPT+GVA
Sbjct: 460 PYVRNTTVPTQGVA 473


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 460 DFRGLCRGS 486
           DFRGLC G+
Sbjct: 411 DFRGLCTGN 419


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 123 SGVLPRVRCSAPESYQP 173
           S   P VR  APE Y P
Sbjct: 281 SAATPLVRSYAPERYPP 297


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 451 LPLILAFPEHFKNTASSS 398
           LPL++  P+   +TASS+
Sbjct: 196 LPLLVPIPQRTASTASSA 213


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 127 VCCREFGAPPRSPISLSC 180
           +CC  FG    +P +L C
Sbjct: 61  ICCGPFGCLVGTPETLRC 78


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 163  DSGAEHRTLGSTPDRLGSPST 101
            D G      GS PDR+G   T
Sbjct: 1397 DDGDYENDSGSGPDRIGRRKT 1417


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 163  DSGAEHRTLGSTPDRLGSPST 101
            D G      GS PDR+G   T
Sbjct: 1397 DDGDYENDSGSGPDRIGRRKT 1417


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 163  DSGAEHRTLGSTPDRLGSPST 101
            D G      GS PDR+G   T
Sbjct: 1397 DDGDYENDSGSGPDRIGRRKT 1417


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 163  DSGAEHRTLGSTPDRLGSPST 101
            D G      GS PDR+G   T
Sbjct: 1397 DDGDYENDSGSGPDRIGRRKT 1417


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 219 MKVNQTVPTEGVAAAEADRTPGRSTELSAAHRTG 118
           M+++  +  EGVA  E     G +   SAA + G
Sbjct: 103 MRLDNMLIAEGVAGPEKGGGAGAAASGSAAAQAG 136


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 342 YKAADTAAKVAHSPPAEAAPCSQPTPRVQLY 250
           ++AA       +S    AAP  QP P +  Y
Sbjct: 103 HQAASAVVDPLNSCSQPAAPGGQPIPDIPRY 133


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 342 YKAADTAAKVAHSPPAEAAPCSQPTPRVQLY 250
           ++AA       +S    AAP  QP P +  Y
Sbjct: 162 HQAASAVVDPLNSCSQPAAPGGQPIPDIPRY 192


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 342 YKAADTAAKVAHSPPAEAAPCSQPTPRVQLY 250
           ++AA       +S    AAP  QP P +  Y
Sbjct: 103 HQAASAVVDPLNSCSQPAAPGGQPIPDIPRY 133


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 342 YKAADTAAKVAHSPPAEAAPCSQPTPRVQLY 250
           ++AA       +S    AAP  QP P +  Y
Sbjct: 162 HQAASAVVDPLNSCSQPAAPGGQPIPDIPRY 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,502
Number of Sequences: 336
Number of extensions: 2803
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)