Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0431
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012) 93 1e-19
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 39 0.002
SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073) 39 0.003
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 38 0.005
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 37 0.011
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 36 0.020
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 36 0.026
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 35 0.035
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 35 0.046
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 34 0.060
SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05) 34 0.060
SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09) 34 0.060
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 34 0.080
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 34 0.080
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 34 0.080
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 34 0.080
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 34 0.080
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 34 0.080
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 34 0.080
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 34 0.080
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 33 0.11
SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 33 0.11
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 33 0.11
SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05) 33 0.11
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 33 0.11
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05) 33 0.14
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 33 0.14
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 33 0.14
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 33 0.18
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 32 0.24
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 32 0.32
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 32 0.32
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 31 0.43
SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 31 0.43
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 31 0.43
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 31 0.56
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 31 0.56
SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022) 31 0.56
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 31 0.56
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 31 0.56
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 31 0.56
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 31 0.56
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07) 31 0.74
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011) 30 0.98
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 30 0.98
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 30 1.3
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 29 1.7
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_27781| Best HMM Match : Ank (HMM E-Value=0) 29 3.0
SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 29 3.0
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 29 3.0
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 28 5.3
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 28 5.3
SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0) 28 5.3
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25) 28 5.3
SB_2939| Best HMM Match : Ku (HMM E-Value=2.8e-07) 28 5.3
SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32) 27 6.9
SB_16291| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-11) 27 6.9
SB_13493| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00046) 27 6.9
SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24) 27 6.9
SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_52669| Best HMM Match : zf-C3HC4 (HMM E-Value=0.05) 27 9.2
SB_27881| Best HMM Match : Keratin_B2 (HMM E-Value=0.5) 27 9.2
SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45) 27 9.2
SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_650| Best HMM Match : rve (HMM E-Value=0.00048) 27 9.2
>SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012)
Length = 450
Score = 93.1 bits (221), Expect = 1e-19
Identities = 35/57 (61%), Positives = 43/57 (75%)
Frame = +1
Query: 82 MPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTII 252
MPIQ PQWT++LTCP+C EF R PISL+CGHT+C+ CL LH+ QCPFDQ +
Sbjct: 1 MPIQTPQWTEFLTCPICYHEFEDRQRGPISLACGHTICKACLSQLHKTQCPFDQATV 57
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Frame = +3
Query: 264 EELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLK----CSG 431
++L VNTALLQL Y P I + E+ + Y +R++EELA++LK G
Sbjct: 62 DKLPVNTALLQLVVLGASVMDYPLPDIPNVRENSSK-YQAAMRSIEELAMYLKPVASSQG 120
Query: 432 NANMSGXXNRLS------RPMQRKLVTLLQC 506
+ S N LS RPMQRKLVTL+ C
Sbjct: 121 TSQSSNGTNGLSSSTTLTRPMQRKLVTLVNC 151
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCPFDQTIIQL 258
L CP+C R F + P+ SCGHT C+ C++ ++CP D + +
Sbjct: 192 LFCPLCRRVF----KDPVITSCGHTFCQACIMARGVEKCPLDDNKLSI 235
>SB_10859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLI------HLHRKQCPFDQTII 252
D ++CP+C +F P P C H +CR CL+ L R +CP + I+
Sbjct: 21 DEISCPICYEDFEEPKCLP---KCAHNICRECLLGIIEKAQLERFECPICRAIV 71
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 115 LTCPVCCREFGA--PPRSPISLSCGHTLCRHCLIHLHRKQ 228
LTCP+C +G P R P L C HT C C++ + Q
Sbjct: 328 LTCPLCYTAYGTGYPQRIPRILDCSHTFCTECIMKIKELQ 367
>SB_49217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
D TC VC EF R P L C HTLC+ C+
Sbjct: 216 DECTCGVCQEEFNEKTRVPKLLHCSHTLCKACV 248
>SB_31924| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00073)
Length = 498
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
D TC VC EF R P L C HTLC+ C+
Sbjct: 319 DECTCGVCQEEFNEKTRVPKLLHCSHTLCKACV 351
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCPFDQTIIQLN 261
C +CCR F +P++ CGH CR CL HR CP ++ + N
Sbjct: 379 CTLCCRLF----YNPVTTPCGHVFCRACLNRSLDHRPGCPICRSSLTQN 423
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQC 231
L+C CC P +L CGHT+C CL K+C
Sbjct: 99 LSCVRCCGIL----LGPCTLPCGHTVCEKCLSKSQAKKC 133
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
D L CP+C EF + P +LSC H LCR CL
Sbjct: 17 DELLCPICLDEF----KEPKTLSCMHDLCRKCL 45
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQC 231
+TC +C ++ + P L+C HT CRHCL L H K+C
Sbjct: 24 VTCSLCLEQY----QDPRVLACLHTYCRHCLESLVEHSKEC 60
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 36.3 bits (80), Expect = 0.015
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 97 PQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQC 231
P+ +TC +C ++ + P L+C HT CRHCL L H K+C
Sbjct: 9 PKDVSDVTCSLCLGQY----QDPRVLACLHTYCRHCLESLVEHSKEC 51
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQC 231
+TC +C ++ + P L+C HT CRHCL L H K+C
Sbjct: 14 VTCCLCLEQY----QDPRVLACLHTYCRHCLESLVEHSKEC 50
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 234
++CPVC F P P SCGH++C CL ++ ++ P
Sbjct: 21 ISCPVCLEVFEEPLVLP---SCGHSVCLQCLQNMTKRNPP 57
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 35.1 bits (77), Expect = 0.035
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 100 QWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
Q D +TC +C F P P C HT CRHCL
Sbjct: 8 QLEDEVTCAICIEHFTDPRLLP----CLHTFCRHCL 39
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 34.7 bits (76), Expect = 0.046
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 76 IRMPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL--HRKQCP 234
IR P + D C +C P++ CGH+ CR CL HR +CP
Sbjct: 315 IRSPASNTEQLDDFECKLCFNLL----LEPVTSLCGHSFCRDCLYRSLDHRVECP 365
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 34.3 bits (75), Expect = 0.060
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLS-CGHTLCRHCLIHLHRKQCPFD----QTIIQLNPRSWL*TR 285
CP+C F R PI + CGH C+ CL L R D + I+ L + W R
Sbjct: 26 CPICQLAF----RDPIQIEECGHRFCQSCLQELRRLYVFVDKAARRAILGLGVKCWNWKR 81
Query: 286 RC 291
+C
Sbjct: 82 KC 83
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 34.3 bits (75), Expect = 0.060
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL----IHLHRK---QCPFDQTIIQLNP 264
D +TC +C F P P C H+ CRHCL +H K CP ++ Q++P
Sbjct: 131 DEVTCSLCIEHFNDPRVLP----CLHSFCRHCLEELAVHSEGKGKLVCPLCKSEFQISP 185
>SB_23995| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-05)
Length = 96
Score = 34.3 bits (75), Expect = 0.060
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK-----QCPFDQ 243
L CP+C E+ P R P C HT+C CL + K +CP D+
Sbjct: 20 LVCPICEEEYDDPKRLP----CMHTICLGCLESMVPKNALIMKCPIDE 63
>SB_15975| Best HMM Match : NHL (HMM E-Value=5e-09)
Length = 589
Score = 34.3 bits (75), Expect = 0.060
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
D +CPVC +F P P +C H +CR CL
Sbjct: 19 DECSCPVCLEDFLEPKSLP---NCAHNVCRKCL 48
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 34.3 bits (75), Expect = 0.060
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL----IHLHRK---QCPFDQTIIQLNP 264
D +TC +C F P P C H+ CRHCL +H K CP + Q++P
Sbjct: 11 DEVTCSLCIEHFNDPRVLP----CFHSFCRHCLEELAVHSEGKGKLVCPLCKAEFQISP 65
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CFHSFCRHCLEEL 42
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CFHSFCRHCLEEL 42
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CFHSFCRHCLEEL 42
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CFHSFCRHCLEEL 42
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CFHSFCRHCLEEL 42
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 10 DEVTCSICIEHFNDPRVLP----CFHSFCRHCLEEL 41
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 33.9 bits (74), Expect = 0.080
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
LTC VC +F R P L C HT C+ CL
Sbjct: 20 LTCSVCLEQF----REPKMLPCFHTFCKECL 46
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 33.9 bits (74), Expect = 0.080
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Frame = +1
Query: 163 PISLSCGHTLCRHCLIHLHRKQ-----CPFDQTIIQL 258
P+ L CGHT C C+I L R Q CP Q + QL
Sbjct: 405 PLLLECGHTYCDSCIIKLSRLQKTQVACPECQHVTQL 441
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CLHSFCRHCLEEL 42
>SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09)
Length = 787
Score = 33.5 bits (73), Expect = 0.11
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Frame = +3
Query: 87 NSGASVDGLPNLSGVLPRVRCSAPESYQPQLR---PHPL*ALSDSPSSETMPLRPDDHTV 257
N ++ + + V P + PE P + P L + S ++++ + PD+ V
Sbjct: 122 NEAPNIPTIEAVKPVEPEITSKPPEK-TPSVAIDMPQRLENTAPSETNDSDVVNPDNKPV 180
Query: 258 EPEELVVNTALLQLAGYAPPSQ--PYQPPCIKALPES 362
+ +V++TA APPS+ +QPP K P S
Sbjct: 181 KRNNIVLSTASWSRKTSAPPSEKNAFQPPMKKTKPSS 217
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CLHSFCRHCLEEL 42
>SB_36857| Best HMM Match : zf-C3HC4 (HMM E-Value=2.8e-05)
Length = 576
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCL 207
CPVC F P P SC H +CR CL
Sbjct: 22 CPVCIEVFEEPKSLP---SCAHNVCRECL 47
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CLHSFCRHCLEEL 42
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 10 DEVTCSICIEHFNDPRVLP----CLHSFCRHCLEEL 41
>SB_36856| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-05)
Length = 406
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCL 207
CPVC F P P SC H +CR CL
Sbjct: 22 CPVCIEVFVEPKSLP---SCAHNVCRECL 47
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 97 PQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
P+ +TC +C ++ + P L+C HT CRHCL
Sbjct: 9 PKDVSDVTCSLCLEQY----QDPRVLACLHTYCRHCL 41
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 103 WTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
+++ LTCPVC E P SC H +C+ CL
Sbjct: 11 FSEELTCPVCLEELKEP---KCLTSCAHNVCKPCL 42
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 16 DEVTCSICIEHFDDPRVLP----CLHSFCRHCLEEL 47
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 97 PQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
P+ +TC +C ++ + P L+C HT CRHCL
Sbjct: 9 PKDVSDVTCSLCLEQY----QDPRVLACLHTYCRHCL 41
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSLCIEHFNDPRVLP----CLHSFCRHCLEEL 42
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ CRHCL L
Sbjct: 11 DEVTCSLCIEHFNDPRVLP----CLHSFCRHCLEEL 42
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK-------QCPFDQTIIQLNP 264
CP+C F + P L C HT C CL+ L + CP + ++Q++P
Sbjct: 16 CPICLERF----KDPRVLPCLHTFCYECLVGLASRYKTEGKWPCPQCKMVVQVSP 66
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 32.7 bits (71), Expect = 0.18
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK-------QCPFDQTIIQLNP 264
CP+C F + P L C HT C CL+ L + CP + ++Q++P
Sbjct: 16 CPICLERF----KDPRVLPCLHTFCYECLVGLASRYKTEGKWPCPQCKMVVQVSP 66
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +1
Query: 118 TCPVCCREFGAPPRSPISLS-CGHTLCRHCL 207
+CP+C EF P +P L CGH C CL
Sbjct: 261 SCPICLEEF--TPETPTRLLVCGHKYCEPCL 289
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 31.9 bits (69), Expect = 0.32
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
+TC +C ++ + P L+C HT CRHCL
Sbjct: 14 VTCCLCLEQY----QDPRVLACLHTYCRHCL 40
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
+TC +C F P P C H+ CRHCL L
Sbjct: 13 VTCSICIEHFNDPRVLP----CLHSFCRHCLEEL 42
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 31.5 bits (68), Expect = 0.43
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D + C +C F P P C H+ CRHCL L
Sbjct: 11 DEVRCSICIEHFNDPRVLP----CFHSFCRHCLEEL 42
>SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066)
Length = 361
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRVQ 256
PP V C +P PT P + + TA + HSPP PC P V+
Sbjct: 47 PPNTVRPCHSP--PTAVHPCH-SPPTAVRPCHSPPTAVHPCHSPPNTVR 92
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRVQ 256
PP V C +P P P + + TA + HSPP PC P V+
Sbjct: 107 PPTAVHPCHSP--PNTVRPCH-SPPTAVRPCHSPPTAVRPCHSPPNTVR 152
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRVQ 256
PP V C +P PT P + + TA + HSPP PC P V+
Sbjct: 117 PPNTVRPCHSP--PTAVRPCH-SPPTAVRPCHSPPNTVRPCHSPPNTVR 162
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRVQ 256
PP V C +P PT P + +T + HSPP PC P V+
Sbjct: 127 PPTAVRPCHSP--PTAVRPCHSPPNTV-RPCHSPPNTVRPCHSPPNTVR 172
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQP 271
PP V C +P PT P + TA + HSPP PC P
Sbjct: 207 PPNTVRPCHSP--PTAVHPCHSPL-TAVRPCHSPPNTVRPCHSP 247
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQP 271
PP V C +P P P + + TA + HSPP PC P
Sbjct: 297 PPNTVRPCHSP--PNTVRPCH-SPPTAVRPCHSPPTAVRPCHSP 337
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRVQ 256
PP V C +P P P + TA HSPP PC P V+
Sbjct: 77 PPTAVHPCHSP--PNTVRPCHSPL-TAVHPCHSPPTAVHPCHSPPNTVR 122
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRV 259
PP V C +P P P + +T + HSPP PC P V
Sbjct: 17 PPTAVHPCHSP--PNTVHPCHSPPNTV-RPCHSPPNTVRPCHSPPTAV 61
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRVQ 256
PP V C +P PT P + +T HSPP PC P V+
Sbjct: 7 PPNTVRPCHSP--PTAVHPCHSPPNTVHP-CHSPPNTVRPCHSPPNTVR 52
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQP 271
PP V C +P P P + +T + HSPP PC P
Sbjct: 137 PPTAVRPCHSP--PNTVRPCHSPPNTV-RPCHSPPNTVRPCHSP 177
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRVQ 256
PP V C +P P P + + TA + HSPP PC P V+
Sbjct: 267 PPNTVRPCHSP--PNTVRPCH-SPPTAFRPCHSPPNTVRPCHSPPNTVR 312
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRVQ 256
PP C +P P P + +T + HSPP PC P V+
Sbjct: 287 PPTAFRPCHSP--PNTVRPCHSPPNTV-RPCHSPPTAVRPCHSPPTAVR 332
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRV 259
PP V C +P T P + TA + HSPP PC P V
Sbjct: 177 PPNTVHPCHSPL--TAVHPCHSPL-TAVRPCHSPPNTVRPCHSPPTAV 221
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPTPRV 259
PP V C +P P P + +T + HSPP PC P V
Sbjct: 147 PPNTVRPCHSP--PNTVRPCHSPPNTV-RPCHSPPNTVHPCHSPLTAV 191
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -1
Query: 402 PPWCV*QCRTPACPTPGEP*YKAADTAAKVAHSPPAEAAPCSQPT 268
PP V C +P PT P + + TA + HSPP P PT
Sbjct: 307 PPNTVRPCHSP--PTAVRPCH-SPPTAVRPCHSPPNTVHPLPFPT 348
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 31.5 bits (68), Expect = 0.43
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Frame = +3
Query: 42 SVIFVMSVRVIYKNANSGASVDGLPNL--SGVLPRVRCSAPESYQPQLRPHPL*ALSDSP 215
S+ V S+ ++ A LP + S L ++ S Y+P R PL + SP
Sbjct: 202 SLSLVTSLSLVSLQAPPSYPYKPLPRILTSPSLVSLQASPSYPYKPLPRYKPLLRILTSP 261
Query: 216 SSETMPLRPDDHTVEPEELVVNTALLQLAGYAPPSQPYQP-PCIKALP 356
S ++ P ++ +P + ++ L L+ APPS PY+P P I P
Sbjct: 262 SLVSLQA-PLSYSYKPLPRIPSSLCL-LSLQAPPSYPYKPLPRIPTSP 307
Score = 30.3 bits (65), Expect = 0.98
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 111 LPNLSGVLPRVRCSAPESY--QPQLRPHPL*ALSDSPSSETMPLRPDDHTVEPEELVVNT 284
LP + V AP SY +P R PL + SPS ++ + P + +P + T
Sbjct: 121 LPRIPTSPSLVSLQAPASYLYKPLPRYKPLPRIPTSPSLVSLQVSPS-YPYKPVSRIP-T 178
Query: 285 ALLQLAGYAPPSQPYQP 335
+L ++ APP PY+P
Sbjct: 179 SLSLVSLQAPPLYPYKP 195
Score = 27.5 bits (58), Expect = 6.9
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 60 SVRVIYKNANSGASVDGLPNLSGVLPRVRCSAPESYQPQLRPH-PL*ALSDSPSSETMPL 236
S ++ A+ S L +S L V AP SY PH PL + +S S ++
Sbjct: 12 SSALVSLQASPSYSYKPLLRISMSLSLVYLQAPPSY-----PHEPLPRIPESLSLVSLQA 66
Query: 237 RPDDHTVEPEELVVNTALLQLAGYAPPSQPYQP-PCIKALP 356
P + +P + T+L ++ APPS PY+P P I P
Sbjct: 67 SPS-YPYKPLPRIP-TSLSLVSLQAPPSYPYKPLPRIHTSP 105
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C F P P C H+ C HCL L
Sbjct: 11 DEVTCSICIEHFNDPRVLP----CFHSFCLHCLEEL 42
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 31.1 bits (67), Expect = 0.56
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL-----HRKQCPFDQTIIQLNPR 267
L CP+C E A PR L C HT C+ CL +L H CP + + L R
Sbjct: 143 LFCPLC-HEMFANPRL---LPCLHTFCKRCLENLVPPRSHTLSCPSCRLDVALGER 194
>SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022)
Length = 476
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRS--PISLSCGHTLCRHCL 207
+ C VC F A P +L+CGHT C CL
Sbjct: 139 MCCSVCYNPFHATESQAIPRNLNCGHTYCTGCL 171
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHR--KQCP 234
D CP+C P CGHT CR C+ + K CP
Sbjct: 674 DSAECPICLETITYPETLQ---GCGHTFCRPCITEASKSSKLCP 714
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ 228
CP+C R F +SP L C HT C C+ + R +
Sbjct: 659 CPICSRPF----KSPKILPCLHTYCSDCVKEIVRSR 690
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHR--KQCP 234
D CP+C P CGHT CR C+ + K CP
Sbjct: 749 DSAECPICLETITYPETLQ---GCGHTFCRPCITEASKSSKLCP 789
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
D +TC +C P P C H+ CRHCL L
Sbjct: 11 DEVTCSICIEHLNDPRVLP----CLHSFCRHCLEEL 42
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL 216
+ L CPVC E+ ++P+ L C H+ C C+ L
Sbjct: 16 EQLMCPVCLGEY----KNPMLLRCYHSFCLRCVQEL 47
>SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07)
Length = 137
Score = 30.7 bits (66), Expect = 0.74
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 234
CPVC F +P + CGH LC+HC + R P
Sbjct: 55 CPVCEDIFVSPVQIK---ECGHRLCQHCYKTIWRSPEP 89
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 30.7 bits (66), Expect = 0.74
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +3
Query: 180 RPHPL*ALSDSPSSETMPLRPDDHTVEPEELVVNTALLQLAGYAPPSQ 323
R HP L+D T RP T PEE T + LA APP+Q
Sbjct: 1012 RAHPK-LLTDHRQQRTTVTRPQLGTTHPEEATTATPGIPLAIAAPPAQ 1058
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIH 213
D C +C FG P+ +CGH C CL+H
Sbjct: 53 DDFKCGIC---FGVL-EDPLVTTCGHVFCSQCLVH 83
>SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.3 bits (65), Expect = 0.98
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 383 CYTHHGGTCCILEMLRKRQYEWQXESTF 466
C+ H TC + EML++ Y++ +S F
Sbjct: 165 CFQHKNHTCLVFEMLQQNLYDYLKQSKF 192
>SB_19444| Best HMM Match : zf-C3HC4 (HMM E-Value=0.011)
Length = 434
Score = 30.3 bits (65), Expect = 0.98
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISL-SCGHTLCRHC 204
CP+C +P++L CGHT C+ C
Sbjct: 235 CPLCQTLMSGSRHTPVALIPCGHTFCQMC 263
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 30.3 bits (65), Expect = 0.98
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 94 APQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHC 204
AP W + C +C +FG R +CG C+ C
Sbjct: 224 APAWAEGDVCHMCRVKFGTFIRQHHCRNCGQVFCKKC 260
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCL--IHLHRKQC 231
CPVC ++ P R P CGH C C+ + L ++C
Sbjct: 71 CPVCLQQASYPVRLP----CGHMFCFLCIKGVALRSRKC 105
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 79 RMPIQAPQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHCL 207
R P+Q D L C P P L C HT C CL
Sbjct: 80 RSPLQMASILDSLRQEAECSLCHKTPSEPKILKCFHTFCNECL 122
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQ--CPFDQTIIQLNP 264
D +C VC F +L+C H+ C +CL RK+ CP + +Q P
Sbjct: 367 DEFSCIVCQELF----IRATTLTCSHSFCEYCLQSWLRKRNTCPICRCAVQSQP 416
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 88 IQAPQWTDYLTCPVCCREFGAPPRSPISL---SCGHTLCRHCLIHLHR 222
IQ + D + CP C G PR + +C +CR C I+ HR
Sbjct: 137 IQENEVKDSIQCPSFC---GMHPREVLKYFCETCDQAICRDCAIYEHR 181
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 28.7 bits (61), Expect = 3.0
Identities = 28/112 (25%), Positives = 46/112 (41%)
Frame = +3
Query: 87 NSGASVDGLPNLSGVLPRVRCSAPESYQPQLRPHPL*ALSDSPSSETMPLRPDDHTVEPE 266
N+ ++DG+P GV P + PE+ + ++ L L PSS + D V +
Sbjct: 846 NNSLTIDGIPIPEGVDPSFLEALPEALRREVLSEQL-GLRPPPSSGSAATSADGGVVSQD 904
Query: 267 ELVVNTALLQLAGYAPPSQPYQPPCIKALPESDRQAYDTVIRTMEELAVFLK 422
L V+ L PP + + L E R+A + T + FL+
Sbjct: 905 PLNVSPEFL---AALPPDVQEEVLQQQRLEEERRRAQQSQPDTPVDPGAFLR 953
>SB_27781| Best HMM Match : Ank (HMM E-Value=0)
Length = 485
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 97 PQWTDYLTCPVCCREFGAPPRSPISLSCGHTLCRHC 204
P W+D +C C +F R CG LC C
Sbjct: 421 PPWSDGDSCHECGMKFSIKNRKHHCRHCGRLLCAKC 456
>SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 617
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHCL 207
C +C EF P + + L CGH+ +HC+
Sbjct: 560 CVICLDEF-KPGCTLLGLPCGHSFHQHCI 587
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHL-HRKQCP 234
D CP C E P + +CGH CR C+ +L KQ P
Sbjct: 1947 DQELCPACFCEVDNPYQLA---TCGHVYCRGCVTNLIEAKQFP 1986
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 384 QCRTPACPTP--GEP*YKAADTAAKVAHSPPAEAAPCSQPTP 265
Q +TPA TP G P TAA A +PP AAP + P
Sbjct: 112 QRKTPAATTPPTGAPAATTPPTAAPAATTPPT-AAPAATTPP 152
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 384 QCRTPACPTP--GEP*YKAADTAAKVAHSPPAEAAPCSQPTP 265
Q +TPA TP G P TAA A +PP AAP + P
Sbjct: 179 QRKTPAATTPPTGAPAATTPPTAAPAATTPPT-AAPAATTPP 219
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 384 QCRTPACPTP--GEP*YKAADTAAKVAHSPPAEAAPCSQPTP 265
Q +TPA TP G P TAA A +PP AAP + P
Sbjct: 2 QRKTPAATTPPTGAPAATTPPTAAPAATTPPT-AAPAATTPP 42
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 109 DYLTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 225
DY CP+C F P ++ CGH C CL + R+
Sbjct: 39 DY-QCPICQLPFRDPVQTR---DCGHRFCESCLEPILRR 73
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 131 AAESSVLRPGVLSASAAATPSVGTV*FTFIGNNAPSTRRSYS 256
AA S+ R VLS+ +A PS GTV ++ T +Y+
Sbjct: 635 AAAGSLYRNSVLSSYGSAAPSYGTVPASYASATGSYTASAYT 676
>SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0)
Length = 2007
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 114 PNLSGVLPRVRCSAPESYQPQLRPH 188
PNL ++ V C P Y PQ PH
Sbjct: 526 PNLENLVDIVSCKIPTVYNPQGTPH 550
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 384 QCRTPACPTP--GEP*YKAADTAAKVAHSPPAEAAPCSQPTP 265
Q +TPA TP G P TAA A +PP AAP + P
Sbjct: 65 QRKTPAATTPPTGAPAATTPPTAAPAATTPPT-AAPAATTPP 105
>SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25)
Length = 401
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 266 GVGCEHGAASAGGLCATFAAVSAALYQGSPGVGQAGVRHCYTH-HG 400
G GC+H A C+ + A+ + G G G H + H HG
Sbjct: 88 GPGCQHAARFGSKYCSDECGIQLAVRKNDVGDGVHGHGHGHGHGHG 133
>SB_2939| Best HMM Match : Ku (HMM E-Value=2.8e-07)
Length = 512
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +2
Query: 251 YS*TRGVGCEHGAASAGGLCATFAAVSAALYQGSPGVG 364
YS G C HG S+ G A VS +YQ S G G
Sbjct: 345 YSSGCGDPCGHGKGSSSGAAIRLAFVSHYIYQRSLGDG 382
>SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32)
Length = 898
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1
Query: 207 QTVPTEGVAAAEADRTPGRSTELSAAHRTG*VVRPLRRLNW 85
Q +PT ++A + TP +T +S R+G +VRP RLN+
Sbjct: 537 QPLPT--ISANQESSTPA-NTRVSQTTRSGRIVRPPTRLNF 574
>SB_16291| Best HMM Match : F5_F8_type_C (HMM E-Value=1.6e-11)
Length = 423
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2
Query: 167 IGLRGGAPNSRQHTGQVR*SVH*GA*IGILINNTYTHHKNNTLYFYP 27
+ +G AP+SRQHT Q S G + ++N ++ +N T+ +P
Sbjct: 336 VATQGRAPDSRQHTHQYVTSY--GLDYSLDVSNWESYKENGTVKIFP 380
>SB_13493| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00046)
Length = 488
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRKQCP 234
+ C +C E + + L CGH C++ L CP
Sbjct: 288 ILCSICLEE--VQKETSVELECGHGNHLKCVLRLRSATCP 325
>SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24)
Length = 346
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = -1
Query: 384 QCRTPACPTP--GEP*YKAADTAAKVAHSPPAEAAPCSQP 271
Q +TPA TP G P TAA A +PP A + P
Sbjct: 287 QRKTPAATTPPTGSPAATTPPTAAPAATTPPTVAPAATTP 326
>SB_13055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Frame = +3
Query: 138 RVRCSAPESYQPQLRPHPL*ALSDSPSSETMPLRPDDHTVEPEELVVNTALLQLAGYAPP 317
R R S S PQ +P P+ + ++ P P E EE + + + P
Sbjct: 283 RSRRSKDRSRSPQRKPSPVARATVGETTSAKPTTPPGSPREEEEAADQSDVRSDDLFEPL 342
Query: 318 SQPYQPPCIKALPESD----RQAYDTVIRTMEELAV 413
+ + P + E+D + AY+ ++ EE+++
Sbjct: 343 TPDHSPTDLFMSDEADDDDEQDAYEEILSDEEEMSL 378
>SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 121 CPVCCREFGAPPRSPISLSCGHTLCRHC 204
CP+C ++F R CG LC C
Sbjct: 48 CPLCSQKFTQIRRKHHCRQCGRVLCNKC 75
>SB_52669| Best HMM Match : zf-C3HC4 (HMM E-Value=0.05)
Length = 280
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 166 ISLSCGHTLCRHCLIHLHRKQCP 234
+ L+CGH+ R C HRK CP
Sbjct: 188 VLLTCGHSFHREC----HRKTCP 206
>SB_27881| Best HMM Match : Keratin_B2 (HMM E-Value=0.5)
Length = 168
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +3
Query: 165 YQPQLRPHPL*ALSDSPSSETMPLRPDDHTVEPEELVVNTALLQLAGYAPPSQ--PYQPP 338
YQP HP+ + P P+ + V+T L Q + P PYQPP
Sbjct: 86 YQPSCINHPVSTIMYQPPCINHPVSTTLYQPSCINHPVSTILYQPSCINHPVSTIPYQPP 145
Query: 339 CI 344
CI
Sbjct: 146 CI 147
>SB_14352| Best HMM Match : NHL (HMM E-Value=2.8026e-45)
Length = 784
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 115 LTCPVCCREFGAPPRSPISLSCGHTLCRHCLIHLHRK 225
L C VC + F P L C H+ C+ C+ L RK
Sbjct: 60 LICRVCNQRFNKPKL----LHCLHSFCQSCIEGLARK 92
>SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 166 ISLSCGHTLCRHCLIHLHRKQCP 234
+ L+CGH+ R C HRK CP
Sbjct: 516 VLLTCGHSFHREC----HRKTCP 534
>SB_9266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 166 ISLSCGHTLCRHCLIHLHRKQCP 234
+ L+CGH+ R C HRK CP
Sbjct: 636 VLLTCGHSFHREC----HRKTCP 654
>SB_650| Best HMM Match : rve (HMM E-Value=0.00048)
Length = 363
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 234 LRPDDHTVEPEELVV--NTALLQLAGYAPPSQPYQPPCIKALPESDRQA 374
LRP + T+ E+ N L Y PP+Q Y PC +AL + + QA
Sbjct: 234 LRPVEVTIGMEKFTNPRNIQLTSTTTYVPPNQVY-VPCSQALYKPEVQA 281
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,733,560
Number of Sequences: 59808
Number of extensions: 372940
Number of successful extensions: 1240
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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