Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0430
         (849 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0300 + 21784634-21784691,21784784-21784893,21787486-217877...    32   0.66 
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750...    31   1.2  
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508...    29   6.2  

>02_04_0300 +
           21784634-21784691,21784784-21784893,21787486-21787771,
           21788292-21788472,21788978-21789195,21789511-21789631,
           21789703-21789800,21789894-21790105,21790199-21790311,
           21790404-21790499,21790626-21790841,21790958-21791099,
           21791280-21791525,21792078-21792389
          Length = 802

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +3

Query: 669 IKICKLVVKLERVHGVIQAGDECVAYTGASG*RDALSYLRTHWNSLLHHYSIRRYSGSQ 845
           +  C +  +L R++G   + DE     GASG RD+L        S+L  Y   ++S S+
Sbjct: 338 VTTCAMAFRLLRMNGYDVSSDELSHVAGASGFRDSLQGYLNDRKSVLEVYKTSKHSISE 396


>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
            26475149-26475260,26475405-26475463,26475559-26475633,
            26475734-26475832,26476128-26476343,26476426-26476500,
            26476583-26476670,26476757-26476902,26477240-26477347,
            26477417-26478436,26478437-26478715,26479471-26480520,
            26480636-26480692,26480780-26480837,26481379-26481458,
            26481598-26481654,26481764-26481833,26481967-26482202,
            26482341-26482445,26482534-26482680,26482758-26482823,
            26482916-26482979,26484040-26484200,26484308-26484400,
            26484487-26484600,26484684-26484803,26484893-26484976,
            26485061-26485216,26485389-26485811
          Length = 1885

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = +3

Query: 438  QVQTSPILASFQLLASWRSTVSQHIYEIRSYSLKPGTMI-EWGNNWARGLTYRRAQNEAF 614
            +V T  + A    + S+   + + IYE RSY +  G ++ E GN++A     RR  +  +
Sbjct: 1164 RVTTVELFAFCSEVISFGQDLRKWIYESRSYLVNMGALLEEQGNSYAE--QNRRTNSSTY 1221

Query: 615  AGYFSQI 635
            AG   Q+
Sbjct: 1222 AGVSQQV 1228


>03_05_0176 +
           21546952-21547887,21548856-21548921,21549959-21550877,
           21551277-21551449,21551927-21552475
          Length = 880

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 489 RSTVSQHIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQ 602
           R T+S +++    YSL P T++    + ARG+ Y  A+
Sbjct: 126 RGTLSAYLHGREPYSLPPETIVRLALDVARGMEYLHAR 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,681,325
Number of Sequences: 37544
Number of extensions: 515698
Number of successful extensions: 1168
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)