Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0430
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 72 5e-13
L14710-1|AAL06038.1| 289|Caenorhabditis elegans Hypothetical pr... 72 5e-13
AJ001262-1|CAA04636.1| 231|Caenorhabditis elegans putative NIPS... 72 5e-13
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 31 1.0
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 31 1.0
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 31 1.0
AY204183-1|AAO39187.1| 406|Caenorhabditis elegans nuclear recep... 28 7.3
AL132948-14|CAD91709.1| 399|Caenorhabditis elegans Hypothetical... 28 7.3
AL132948-13|CAD31815.2| 509|Caenorhabditis elegans Hypothetical... 28 7.3
AF273839-1|AAG15186.1| 470|Caenorhabditis elegans nuclear recep... 28 7.3
AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine re... 28 7.3
Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical pr... 28 9.6
U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of ... 28 9.6
AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium cha... 28 9.6
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 72.1 bits (169), Expect = 5e-13
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +3
Query: 456 ILASFQLLASWRSTVSQHIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 635
I+ SF H+Y++RSY L+PGTMI+W + WA+G+ YRR N+ G+F+Q+
Sbjct: 408 IVKSFSYWREPEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQDVGGFFAQV 467
Query: 636 GRLYM 650
G+LY+
Sbjct: 468 GQLYV 472
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 NTSHKAELGCELVGSWTVSVG-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESER 426
N ++ ELVGSWT + G DQA+HL+++ G+E +D + L +DS + +++
Sbjct: 338 NEMNQKNPSIELVGSWTCAYGRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDV 397
Query: 427 GKMVRSRHLQYLLAFSFWPAGEVRSPN 507
K+ R + +FS+W E R PN
Sbjct: 398 AKLCGRRKNLIVKSFSYWREPEQRPPN 424
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +2
Query: 89 GWFSKLLV-RRIEPT---KESHSRMLSDKEVIYALHTHNIRPDSVDNYLKNYKQH 241
GW S+LL + ++P+ K+SHS +LS+ E++Y THN RP D YL + ++
Sbjct: 282 GWISRLLKGQSMDPSSWQKQSHSSLLSNSELMYEFMTHNYRPGEQDAYLDAFGKY 336
Score = 44.8 bits (101), Expect = 8e-05
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 599 AKRGVCGLFLTNWPIIHVHHIWCYKDLQARRETRESTWRNPGW 727
A + V G F + V+HIW Y + R +TR +TW PGW
Sbjct: 456 ANQDVGGFFAQVGQLYVVYHIWAYPSMSGRNDTRHATWAKPGW 498
>L14710-1|AAL06038.1| 289|Caenorhabditis elegans Hypothetical
protein K02D10.1b protein.
Length = 289
Score = 72.1 bits (169), Expect = 5e-13
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +3
Query: 456 ILASFQLLASWRSTVSQHIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 635
I+ SF H+Y++RSY L+PGTMI+W + WA+G+ YRR N+ G+F+Q+
Sbjct: 171 IVKSFSYWREPEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQDVGGFFAQV 230
Query: 636 GRLYM 650
G+LY+
Sbjct: 231 GQLYV 235
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 NTSHKAELGCELVGSWTVSVG-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESER 426
N ++ ELVGSWT + G DQA+HL+++ G+E +D + L +DS + +++
Sbjct: 101 NEMNQKNPSIELVGSWTCAYGRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDV 160
Query: 427 GKMVRSRHLQYLLAFSFWPAGEVRSPN 507
K+ R + +FS+W E R PN
Sbjct: 161 AKLCGRRKNLIVKSFSYWREPEQRPPN 187
Score = 44.8 bits (101), Expect = 8e-05
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Frame = +2
Query: 89 GWFSKLLV-RRIEPT---KESHSRMLSDKEVIYALHTHNIRPDSVDNYLKNYKQH 241
GW S+LL + ++P+ K+SHS +LS+ E++Y THN RP D YL + ++
Sbjct: 45 GWISRLLKGQSMDPSSWQKQSHSSLLSNSELMYEFMTHNYRPGEQDAYLDAFGKY 99
Score = 44.8 bits (101), Expect = 8e-05
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 599 AKRGVCGLFLTNWPIIHVHHIWCYKDLQARRETRESTWRNPGW 727
A + V G F + V+HIW Y + R +TR +TW PGW
Sbjct: 219 ANQDVGGFFAQVGQLYVVYHIWAYPSMSGRNDTRHATWAKPGW 261
>AJ001262-1|CAA04636.1| 231|Caenorhabditis elegans putative NIPSNAP
protein protein.
Length = 231
Score = 72.1 bits (169), Expect = 5e-13
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +3
Query: 456 ILASFQLLASWRSTVSQHIYEIRSYSLKPGTMIEWGNNWARGLTYRRAQNEAFAGYFSQI 635
I+ SF H+Y++RSY L+PGTMI+W + WA+G+ YRR N+ G+F+Q+
Sbjct: 113 IVKSFSYWREPEQRPPNHVYDLRSYVLQPGTMIDWASAWAKGIQYRREANQDVGGFFAQV 172
Query: 636 GRLYM 650
G+LY+
Sbjct: 173 GQLYV 177
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 NTSHKAELGCELVGSWTVSVG-DMDQALHLFKYVGGFEKIDKAKQLFKQDSSYQLLESER 426
N ++ ELVGSWT + G DQA+HL+++ G+E +D + L +DS + +++
Sbjct: 43 NEMNQKNPSIELVGSWTCAYGRTRDQAIHLWRHNKGYEDVDSSISLHGKDSGIRAADNDV 102
Query: 427 GKMVRSRHLQYLLAFSFWPAGEVRSPN 507
K+ R + +FS+W E R PN
Sbjct: 103 AKLCGRRKNLIVKSFSYWREPEQRPPN 129
Score = 44.8 bits (101), Expect = 8e-05
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +2
Query: 599 AKRGVCGLFLTNWPIIHVHHIWCYKDLQARRETRESTWRNPGW 727
A + V G F + V+HIW Y + R +TR +TW PGW
Sbjct: 161 ANQDVGGFFAQVGQLYVVYHIWAYPSMSGRNDTRHATWAKPGW 203
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 131 KESHSRMLSDKEVIYALHTHNIRPDSVDNYLKNYKQH 241
K+SHS +LS+ E++Y THN RP D YL + ++
Sbjct: 5 KQSHSSLLSNSELMYEFMTHNYRPGEQDAYLDAFGKY 41
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 290 DHGQYQLEIWIKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 412
D +++ W+K ++ + K+ T PNN K+++ NC
Sbjct: 2590 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2630
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 290 DHGQYQLEIWIKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 412
D +++ W+K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 290 DHGQYQLEIWIKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 412
D +++ W+K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 290 DHGQYQLEIWIKLCIYSNMLVDLKKLTRPNNCLNKILVTNC 412
D +++ W+K ++ + K+ T PNN K+++ NC
Sbjct: 2601 DWSKFKHAFWLKFALWGMLRTIAKRPTDPNNKRKKVILLNC 2641
>AY204183-1|AAO39187.1| 406|Caenorhabditis elegans nuclear receptor
NHR-95 protein.
Length = 406
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 616 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 515
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 151 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 184
>AL132948-14|CAD91709.1| 399|Caenorhabditis elegans Hypothetical
protein Y39B6A.17b protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 616 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 515
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 144 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 177
>AL132948-13|CAD31815.2| 509|Caenorhabditis elegans Hypothetical
protein Y39B6A.17a protein.
Length = 509
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 616 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 515
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 144 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 177
>AF273839-1|AAG15186.1| 470|Caenorhabditis elegans nuclear receptor
NHR-95 protein.
Length = 470
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -3
Query: 616 ANASFCARR*VRPRAQLLPHSIIVPGFKLYDRIS 515
A+ SFCA ++ + LP+ II P FK+ ++++
Sbjct: 105 ASPSFCAGNQLKKLSLGLPNQIIAPRFKMAEKVA 138
>AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform b protein.
Length = 304
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 53 VISTSALLNTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIYALHT 187
V+ AL+ W LL+RR+ K S R+ + + + A+H+
Sbjct: 2 VVFPIALIGVMANWTVALLIRRLPSLKNSFGRLTASQSIGDAIHS 46
>Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical
protein F02C12.1 protein.
Length = 815
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 77 NTDDGWFSKLLVRRIEPTKESHSRMLSDKEVIYALHTHNI 196
NT+ + + +E K+ H ML+DK V +H H++
Sbjct: 579 NTEGQQGNSKMKANLETIKDIHKAMLADKHVEAHIHEHDV 618
>U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of
potassium channelsprotein 16 protein.
Length = 555
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 401 LESCLNNCLALSIFSNPPTYLNKCRA*SISPTDTVHDPTSSQPSS 267
LE+ + +A+ PP LN SP +H P S++PS+
Sbjct: 327 LENVVERTIAMQEGREPPEDLNDEPPREPSPRSIIHSPCSTRPSN 371
>AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium
channel subunit n2P16 protein.
Length = 555
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 401 LESCLNNCLALSIFSNPPTYLNKCRA*SISPTDTVHDPTSSQPSS 267
LE+ + +A+ PP LN SP +H P S++PS+
Sbjct: 327 LENVVERTIAMQEGREPPEDLNDEPPREPSPRSIIHSPCSTRPSN 371
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,659,786
Number of Sequences: 27780
Number of extensions: 462632
Number of successful extensions: 1225
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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