Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0426
         (753 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0295 - 32897545-32897805,32897859-32898714,32898843-32899096     29   4.0  
08_02_1455 + 27230134-27231110,27231195-27231327,27231417-272315...    28   9.2  

>03_06_0295 - 32897545-32897805,32897859-32898714,32898843-32899096
          Length = 456

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 711 PTEGDPIRLVSVDGGFALLRRGRIRTCIP 625
           P    P+R +S D G + LRR ++R C+P
Sbjct: 130 PVYSFPLRRISRDPGASRLRRLKLRNCLP 158


>08_02_1455 +
           27230134-27231110,27231195-27231327,27231417-27231501,
           27233372-27233571
          Length = 464

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -2

Query: 434 RTFRLSPNSPAGTPQSPTPLPRLLVIVRERAFAFVRVKATPLTSALPSA 288
           R   LSP  P   P+SPTPL          A ++ R+  +    A P A
Sbjct: 12  RPHHLSPGQPPVVPRSPTPLDLSSAAAAAAAASYRRLSPSLRPPAHPQA 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,584,944
Number of Sequences: 37544
Number of extensions: 457835
Number of successful extensions: 1355
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)