Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0426
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   2.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   2.3  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   4.1  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   4.1  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   4.1  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   4.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   7.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.1  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 298 FLLLPGCTNKGKG*APP*SPQRYRL*LMPIGVDRVVG 188
           FLLL  CT   +G A P S QR  +   P+ V+   G
Sbjct: 10  FLLLSSCTRPSRGNAVP-SSQRGNVHNDPLVVETTSG 45


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -3

Query: 298 FLLLPGCTNKGKG*APP*SPQRYRL*LMPIGVDRVVG 188
           FLLL  CT   +G A P S QR  +   P+ V+   G
Sbjct: 10  FLLLSSCTRPSRGNAVP-SSQRGNVHNDPLVVETTSG 45


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
          determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 14 REFQSRKRYYIKLCWNASKLV 76
          RE++ + R Y KLC    KL+
Sbjct: 10 REYRKKDRQYEKLCNEEEKLL 30


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
          determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 14 REFQSRKRYYIKLCWNASKLV 76
          RE++ + R Y KLC    KL+
Sbjct: 10 REYRKKDRQYEKLCNEEEKLL 30


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
          determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 14 REFQSRKRYYIKLCWNASKLV 76
          RE++ + R Y KLC    KL+
Sbjct: 10 REYRKKDRQYEKLCNEEEKLL 30


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
          determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 14 REFQSRKRYYIKLCWNASKLV 76
          RE++ + R Y KLC    KL+
Sbjct: 10 REYRKKDRQYEKLCNEEEKLL 30


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 508 PWHFVVTR 531
           PWHFVV R
Sbjct: 296 PWHFVVDR 303


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = -1

Query: 441 IPENIQIISEFSGGHTPIANTAAPASCYSTGTCLRLCTC*SNSADVSTSFCSLVVRIRVR 262
           +P N++ I      H P ++T+ PA+  +T T     T  + +A  +T+   L+ +  ++
Sbjct: 82  VPGNLEQIGS-RPLHPPASSTSLPATITTTTTTTTTTTA-TAAATATTTATGLIKQETLQ 139

Query: 261 VKHLL 247
             H L
Sbjct: 140 RHHHL 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,235
Number of Sequences: 438
Number of extensions: 4956
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)