Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0424
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    24   1.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.0  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   7.0  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   9.2  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 683 SIPLSWPTVSDHTVNRISRYIPYPEY 606
           S+PL +P       +  +RY PYP +
Sbjct: 157 SLPLHYPPPPPVYTHHYARYHPYPNF 182


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = +3

Query: 471 LTYMEHKRTTQTSIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWV 617
           LT   H  T   +      PV+  + +SF G++  FV  +       W+
Sbjct: 360 LTIQGHDLTLIATDGEPVHPVRVNTIISFSGERYDFVINADQTPGAYWI 408


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/49 (24%), Positives = 20/49 (40%)
 Frame = +3

Query: 471 LTYMEHKRTTQTSIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWV 617
           LT   H  T   +      PV+  + +SF G++  FV  +       W+
Sbjct: 360 LTIQGHDLTLIATDGEPVHPVRVNTIISFSGERYDFVINADQTPGAYWI 408


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 711  PFCKWDWDNNVCPW 752
            P   WD + N+C W
Sbjct: 1309 PGLHWDNNKNICDW 1322


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +3

Query: 606 ILWVWNVPRNSVD 644
           ++ +WN+PR ++D
Sbjct: 436 LMEMWNIPRENID 448


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +1

Query: 319 EKGVSTEDTLEVEYLER 369
           ++ ++  DTL+++YLER
Sbjct: 34  DRPITFNDTLQMKYLER 50


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +1

Query: 340 DTLEVEYLER 369
           DTLE++YLER
Sbjct: 41  DTLEMKYLER 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,328
Number of Sequences: 336
Number of extensions: 5212
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)