Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0424
(844 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1163 - 24439976-24440023,24440562-24440597,24440932-244410... 69 5e-12
01_01_0742 + 5759505-5759639,5760497-5760593,5760694-5760755,576... 33 0.22
10_08_0810 + 20734490-20734606,20735182-20735433,20735521-207356... 33 0.38
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 32 0.66
06_03_1454 - 30261240-30261470,30261896-30262615,30262700-302628... 32 0.66
09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190 31 1.5
04_04_0589 + 26449184-26450500,26452220-26452310,26452428-264525... 31 1.5
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 31 1.5
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 31 1.5
10_08_0941 - 21717703-21718091,21718454-21718564,21718707-217187... 30 2.7
07_03_0971 + 23038409-23039134,23040321-23040611 30 2.7
02_02_0017 - 6131265-6131284,6131654-6131774,6132011-6132146,613... 30 2.7
03_06_0063 - 31391870-31392679 29 3.5
01_07_0161 + 41574749-41576044 29 3.5
12_02_0393 - 18550972-18551562,18551864-18552005,18552164-185523... 29 4.6
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 29 4.6
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 29 4.6
01_04_0100 + 16017117-16017196,16017283-16017694 29 4.6
03_05_1069 + 30118930-30120120 29 6.1
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 29 6.1
01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001 29 6.1
01_05_0816 + 25462571-25462630,25462752-25462838,25462929-254629... 29 6.1
06_02_0068 + 11107493-11107653,11109116-11109218,11109311-111094... 28 8.1
03_05_0621 - 26198985-26199020,26199539-26199652,26200260-262006... 28 8.1
02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202 28 8.1
01_06_0930 + 33134385-33138257 28 8.1
>07_03_1163 -
24439976-24440023,24440562-24440597,24440932-24441018,
24441349-24441492,24441782-24441916,24442215-24442279,
24442395-24442477,24442607-24442642,24443343-24443449,
24443558-24443658,24443750-24443909
Length = 333
Score = 68.9 bits (161), Expect = 5e-12
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 262 FDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQ-AHS 438
FDFLV GEL+ L E L KG+S E LE+EY++ +D HDDWVSAV ++
Sbjct: 63 FDFLVDGELVRLPLQEFLLAKGISVERVLELEYVKAVAPRKQEDPCPHDDWVSAVDGSNP 122
Query: 439 SWILSGSYDNSLHIW 483
S++L+G YD IW
Sbjct: 123 SFVLTGCYDGLARIW 137
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 445 ILSGSYDNSLHIWSTKGQHK 504
I SGS+DNS+ +WS +G +
Sbjct: 185 ICSGSWDNSIKLWSVEGSEE 204
>01_01_0742 +
5759505-5759639,5760497-5760593,5760694-5760755,
5760842-5760898,5761062-5761118,5761501-5761534,
5761788-5761822,5761956-5762046,5762312-5762633,
5762710-5762845,5763031-5763120
Length = 371
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 507 SIPGHTSPVKAVSWVSFQGDQATF-VSGSHDQTAILWVWN 623
++ GHTS V V++ +F G++ F VSG +D + LW W+
Sbjct: 286 TVGGHTSSVSCVTFSAF-GEKGKFLVSGGNDSSIKLWDWS 324
>10_08_0810 +
20734490-20734606,20735182-20735433,20735521-20735664,
20735774-20736493,20736955-20737177,20737463-20737523,
20738294-20738615
Length = 612
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 540 VSWVSFQGDQATFVSGSHDQTAILWVWN 623
V+ V F D T +SGS DQ +LW W+
Sbjct: 58 VNTVGFNADGDTLISGSDDQMVMLWDWD 85
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 SIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNV-PRNSVDCMITYRGPRQ 674
++ GH + VK+VSW S G + + S D++ +W+W + P N +C+ +G Q
Sbjct: 111 TLEGHENEVKSVSW-SASG--SLLATCSRDKS--VWIWEMQPGNEYECVSVQQGHTQ 162
>06_03_1454 -
30261240-30261470,30261896-30262615,30262700-30262843,
30262953-30263204,30263542-30263751
Length = 518
Score = 31.9 bits (69), Expect = 0.66
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 540 VSWVSFQGDQATFVSGSHDQTAILWVW 620
V+ +SF D + +SGS D+ A+LW W
Sbjct: 89 VNTISFNEDGSLLLSGSDDRAAVLWNW 115
>09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190
Length = 1218
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 403 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAYQVIHHQ*KQYHGCPSRVIKLH 576
H D++ VQ H WI+S S D ++ IW+ + + +A H+ Y C S K
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHN---HYVMCASFHPKED 148
Query: 577 LLVDLMIKQ 603
L+V + Q
Sbjct: 149 LVVSASLDQ 157
>04_04_0589 +
26449184-26450500,26452220-26452310,26452428-26452585,
26452670-26452768,26453296-26453345,26453654-26453705,
26453773-26454058,26454286-26454400,26454938-26455020,
26455381-26455466
Length = 778
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 289 LCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAH---SSWILSGS 459
LC S +++L S + T+++ ++ R H D+V+ +Q + + +SGS
Sbjct: 433 LCWSKSQYLLSS--SMDKTVKLWHMSRTSC---LKTFSHSDYVTCIQFNPVDDRYFISGS 487
Query: 460 YDNSLHIWSTKGQHKLAYQVIH 525
D + IWS G+ + + +H
Sbjct: 488 LDEKVRIWSIPGREIVDWNDLH 509
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 403 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAYQVIHHQ*KQYHGCPSRVIKLH 576
H D++ VQ H WI+S S D ++ IW+ + + +A H+ Y C S K
Sbjct: 92 HLDYIRTVQFHHECPWIVSASDDQTIRIWNWQSRTCVAVLTGHN---HYVMCASFHPKED 148
Query: 577 LLVDLMIKQ 603
L+V + Q
Sbjct: 149 LVVSASLDQ 157
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 403 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAYQVIHHQ*KQYHGCPSRVIKLH 576
H D++ VQ H WI+S S D ++ IW+ + + +A H+ Y C S K
Sbjct: 92 HLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHN---HYVMCASFHPKED 148
Query: 577 LLVDLMIKQ 603
L+V + Q
Sbjct: 149 LVVSASLDQ 157
>10_08_0941 -
21717703-21718091,21718454-21718564,21718707-21718791,
21718885-21719106,21719804-21720292,21722206-21722322
Length = 470
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/57 (17%), Positives = 27/57 (47%)
Frame = +3
Query: 498 TQTSIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGP 668
+Q + +P + + +S+ D F + + + LW+W++ R + ++ + P
Sbjct: 327 SQKPVTDKPNPKQGIGMLSWSSDSHYFFTRNDNMPTALWIWDICRLDLAAVLVQKDP 383
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 507 SIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 614
+I H+ PV +V ++ D + VSGSHD T +W
Sbjct: 170 AIDAHSEPVTSVHFIR---DGSIIVSGSHDGTCKIW 202
>02_02_0017 -
6131265-6131284,6131654-6131774,6132011-6132146,
6132423-6132529,6133006-6133099,6133199-6133395,
6134401-6134472,6135128-6135304,6135393-6135467,
6135557-6135697,6136439-6136627,6136969-6137034,
6137118-6137268,6137596-6137664,6138751-6138899,
6138969-6139100,6139198-6139523,6139599-6139635,
6139765-6139803,6140196-6140250,6140363-6140424,
6140512-6140532,6140820-6140822
Length = 812
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 507 SIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 614
++ GH+ V V + + GD+ ++GS DQTA +W
Sbjct: 193 TLDGHSKGVNCVDYFT-GGDRPYLITGSDDQTAKVW 227
>03_06_0063 - 31391870-31392679
Length = 269
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -3
Query: 752 PRTNIVIPVPLAKRLPSADTDRHSIPLSWPTVSDHTVNRISR 627
P ++ P P+A LPSA+ DR S SD NR+ R
Sbjct: 127 PAAPVLAPAPVAALLPSAE-DREPATSSTAASSDGMTNRVHR 167
>01_07_0161 + 41574749-41576044
Length = 431
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 403 HDDWVSAVQAHSSWILSGSYDNSLHIW 483
H D +S + H + SGS+D +L +W
Sbjct: 187 HADSISCLAVHDGVVYSGSWDKTLKVW 213
>12_02_0393 -
18550972-18551562,18551864-18552005,18552164-18552382,
18552733-18552828,18552923-18553035,18553299-18553510,
18553603-18553700,18554283-18554314,18554984-18555068,
18555853-18555914
Length = 549
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 301 LAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNS 471
L + L +ST EVEY+ +FP + D L H + + S +L Y S
Sbjct: 147 LKQQLLSNKLSTSAQSEVEYVLKFPLHSTLDRLEHRRNIEQFKVEGSKVLKSGYCGS 203
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 510 IPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 614
+P H+ PV +V F D A VSGS+D +W
Sbjct: 151 LPAHSEPVTSVD---FNRDGAMIVSGSYDGLCRIW 182
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 29.1 bits (62), Expect = 4.6
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Frame = -1
Query: 445 SNYCVPEQLTPNHRALNSPVELVQGTFPSIRPQACPLSIPLFLVSALRGRHKVTLHILRN 266
+N C+ + NH L+ P G IR ++ L+ R H+V L
Sbjct: 1260 NNKCMELRKVCNHPLLSYPFMNYYGKDFIIRSCGKLWNLDRILIKLHRSGHRVLLFSTMT 1319
Query: 265 QILPLLE---RW*GLLQNCVD*GIKVR-RVYVTLDSVRTIRNCILFLFSYKS 122
++L +LE +W L+ +D + R +D R +C +FL S ++
Sbjct: 1320 KLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNRPNSDCFIFLLSIRA 1371
>01_04_0100 + 16017117-16017196,16017283-16017694
Length = 163
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 567 QATFVSGSHDQTAILWVWNVPRNSVDCMITYRG 665
+ T V GSH ++W W++ ++VD + G
Sbjct: 131 RGTLVQGSHMSAELVWWWSLGASAVDSQVVSSG 163
>03_05_1069 + 30118930-30120120
Length = 396
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 403 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKG 495
H V + A S +LSGS DN++++W G
Sbjct: 265 HKKAVFCLAAAGSLLLSGSADNTIYVWRRDG 295
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 477 YMEHKRTTQT--SIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 614
Y+ H+ T ++PGHT V VSW + S S D T +W
Sbjct: 470 YIWHRATGDLIETLPGHTGTVNCVSW--NPANPHMLASASDDHTIRIW 515
>01_06_0929 + 33091184-33091510,33092503-33092646,33093054-33097001
Length = 1472
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 310 HLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSL 474
HL V D +E LE P+ + L + + SA+ + SW+L GSY +L
Sbjct: 936 HLSWNDVYGMDVSHLEILEGLRPPSQLEDLTIEGYKSAM--YPSWLLDGSYFENL 988
>01_05_0816 +
25462571-25462630,25462752-25462838,25462929-25462961,
25462962-25463030,25463146-25463339,25463632-25463773,
25464126-25464165,25464428-25464594,25465114-25465116,
25465371-25465499,25465811-25465888,25465974-25465979
Length = 335
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 510 IPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 614
+ GH +PVK ++W+ VSGS D+T W
Sbjct: 119 LSGHEAPVKELAWIP---QMNLLVSGSWDKTLRYW 150
>06_02_0068 +
11107493-11107653,11109116-11109218,11109311-11109423,
11109502-11109624,11110165-11110266,11110367-11110532,
11111215-11111331,11111438-11111478,11111735-11111836,
11111924-11112140,11112271-11112498,11112580-11112707,
11112804-11112921,11113020-11113235,11113314-11113463,
11113553-11113629,11113973-11114190,11114443-11114656,
11114744-11114823,11114898-11115015,11115092-11115262,
11116124-11116292,11116404-11116447,11116620-11116662,
11116743-11116888,11118337-11118431,11118579-11119477,
11120540-11120638,11120907-11121002,11123447-11123568,
11123675-11123767,11123922-11124114
Length = 1653
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 799 TFLRSWMVSFFC*LALQGQTLLSQSHLQNGYHQPTQTG 686
++L W+ FFC L Q L S S + GY +G
Sbjct: 508 SYLSEWLDEFFCRLFSVLQNLESSSPINEGYQSSIMSG 545
>03_05_0621 -
26198985-26199020,26199539-26199652,26200260-26200623,
26201232-26201527
Length = 269
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 631 EILLTV*SLTVGHDKGIECLSVSADGNRFASGT 729
E++L + +L H+ I CL +S+DG+ +G+
Sbjct: 220 EVVLNLGNLQNSHEGRISCLGLSSDGSALCTGS 252
>02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202
Length = 580
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 764 LAGTPRTNIVIPVPLAKRLPSADTDRHSIPLSWPTVSDHTVNRISRYIPYPEY 606
+ GTP+T + P P A P + +IP P +H Y PYP Y
Sbjct: 83 IKGTPKTPVPPPFPPAPPPPPNQNNLPNIPNYNPYNVNHQYIPPFYYPPYPPY 135
>01_06_0930 + 33134385-33138257
Length = 1290
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 310 HLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSL 474
HL V D +E LE P+ + L + + S + + SW+L GSY +L
Sbjct: 754 HLSWNDVDDMDVSHLEILEGLRPPSQLEDLTIEGYKSTM--YPSWLLDGSYFENL 806
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,711,000
Number of Sequences: 37544
Number of extensions: 557259
Number of successful extensions: 1497
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1496
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -