Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0424
(844 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.054
SB_54813| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_58212| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-38) 30 2.0
SB_57199| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 2.0
SB_3213| Best HMM Match : zf-C2H2 (HMM E-Value=3.8e-40) 30 2.7
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 29 3.6
SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45) 29 3.6
SB_34358| Best HMM Match : DUF1280 (HMM E-Value=7) 29 3.6
SB_17431| Best HMM Match : RVT_1 (HMM E-Value=1.8e-25) 29 3.6
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 29 3.6
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_56328| Best HMM Match : NHL (HMM E-Value=0.082) 29 4.7
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 29 4.7
SB_2811| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15) 29 6.2
SB_19442| Best HMM Match : Beach (HMM E-Value=0) 29 6.2
SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21) 29 6.2
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 29 6.2
SB_38417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 28 8.2
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 28 8.2
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10) 28 8.2
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 35.5 bits (78), Expect = 0.054
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 513 PGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGPRQGN 680
P SP V +VSF D + + + LW+W++P ++ ++ P +GN
Sbjct: 664 PEKHSPKLGVGYVSFSADSRYMATKNDNMPNALWIWDMPNLTLAVLLLQAQPIRGN 719
>SB_54813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 283 ELLCASLAEHLQE--KGVSTEDTLEVEYLERFPAPTPQDCLMHDDW 414
+L+C S L E S+EDT+ V +L+ P P+ C+ ++W
Sbjct: 337 DLICLSTDSELSEAMSHQSSEDTVRV-FLKTADTPAPEQCISPEEW 381
>SB_58212| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-38)
Length = 352
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -1
Query: 532 TGDV*PGMLVCVVLLCSIYVSYCHNFLIESNY 437
TG + G+L +VLLCSI + YC+ +I+ Y
Sbjct: 182 TGMIYWGVLAVIVLLCSITMLYCYFNIIKGLY 213
>SB_57199| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 374
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = -1
Query: 331 IPLFLVSALRGRHKVTLHILRNQILP 254
+PL L++AL R TLH+LRN+I+P
Sbjct: 207 LPLLLITALYAR---TLHLLRNRIIP 229
>SB_3213| Best HMM Match : zf-C2H2 (HMM E-Value=3.8e-40)
Length = 595
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 352 VEYLERFPAPTPQDCLMHD--DWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAYQVIH 525
VE+L++ Q C+ D + Q S +SGS +SLH ST H Q+I
Sbjct: 39 VEFLDQIFKNAEQHCVNFDTVEGEGTSQGFSLQAVSGSQTSSLHQQSTVASHYHLIQIIQ 98
Query: 526 HQ 531
Q
Sbjct: 99 EQ 100
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 331 STEDTLEVEYLERFPAPTPQDCLMHDDWVS--AVQAHSSWILSGSYDNSLHIWSTKG 495
S +D L+V E + Q + H W+S A+ I+SGS D ++ +W T G
Sbjct: 481 SKDDLLKVWRTESWVCT--QTLIGHSSWISCVAMTTDGKTIISGSNDKNVKMWYTHG 535
>SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45)
Length = 2022
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 355 EYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKG 495
+ LE A TP D L + W S+ A W ++ +Y S + S G
Sbjct: 1582 QVLEELIAETPSDLLSRELWCSSTGALEWWHMTKTYARSTAVMSMIG 1628
>SB_34358| Best HMM Match : DUF1280 (HMM E-Value=7)
Length = 359
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/110 (21%), Positives = 43/110 (39%)
Frame = +1
Query: 247 REGVIFDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAV 426
R+ D+ + C S L + G S VE PT D S +
Sbjct: 68 RDTGTLDWCFTNKSKCLSTPIQLPKLGTSDHYCFLVENNRPRIKPTKTVVTKRDTRASCI 127
Query: 427 QAHSSWILSGSYDNSLHIWSTKGQHKLAYQVIHHQ*KQYHGCPSRVIKLH 576
++ WI S S+D ++ S + + + Y+ I ++ P R +++H
Sbjct: 128 RSFGQWITSYSWDELYNLTSCREKFEWFYRKIMEAIDKF--LPMRSVRMH 175
>SB_17431| Best HMM Match : RVT_1 (HMM E-Value=1.8e-25)
Length = 867
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/110 (21%), Positives = 43/110 (39%)
Frame = +1
Query: 247 REGVIFDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAV 426
R+ D+ + C S L + G S VE PT D S +
Sbjct: 303 RDTGTLDWCFTNKSKCLSTPIQLPKLGTSDHYCFLVENNRPRIKPTKTVVTKRDTRASCI 362
Query: 427 QAHSSWILSGSYDNSLHIWSTKGQHKLAYQVIHHQ*KQYHGCPSRVIKLH 576
++ WI S S+D ++ S + + + Y+ I ++ P R +++H
Sbjct: 363 RSFGQWITSYSWDELYNLTSCREKFEWFYRKIMEAIDKF--LPMRSVRMH 410
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 421 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAYQVIHH 528
A A + SGS+D S+ IW GQ A+++ H
Sbjct: 94 AWDAEKRLLFSGSFDQSIIIWDIGGQQGTAFELQGH 129
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +3
Query: 486 HKRTTQTSIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRG 665
H++ S+ H + V+ F D VSGS D+T LW R S DC+ T+
Sbjct: 58 HRQKFLYSLNAHMNWVRCAK---FSPDGRLIVSGSDDKTIKLW----DRTSKDCVHTFYD 110
Query: 666 P 668
P
Sbjct: 111 P 111
>SB_56328| Best HMM Match : NHL (HMM E-Value=0.082)
Length = 454
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 421 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAYQVI 522
A+ +I++ DN + ++ + G+HKL+++VI
Sbjct: 186 AMTTEDEFIVADRTDNKVKVFGSAGEHKLSFEVI 219
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 507 SIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITY 659
S+ GHTSPV+ V F + V+GS T +W + + +I +
Sbjct: 56 SLAGHTSPVEC---VQFNSGEDLVVAGSQSGTLKIWDLEAAKRKLHALIMW 103
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 427 QAHSSWILSGSYDNSLHIWSTKGQHKLAYQVI 522
Q S+ I+SGSYD+++ W + + + QVI
Sbjct: 665 QPDSTVIISGSYDSTIRCWDCRSRSQEPVQVI 696
>SB_2811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 241 IVREGVIFDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLM--HDDW 414
+ R+ D+ + C + + L + G S D V + P+ C M D
Sbjct: 87 LTRDTGTLDWCLTNNPKCLQVPKQLPKIGRS--DHYGVLIQQAPPSQKGVKCTMTKRDTR 144
Query: 415 VSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAYQVIHHQ*KQYHGCPSRVIKLH 576
SA++ SWI S S+D + + K + L YQ++ Q+ P + ++H
Sbjct: 145 DSALRGFGSWITSFSWDEVYCLDNCKEKFDLFYQILSDAINQF--LPLKTFRVH 196
>SB_33339| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.15)
Length = 1224
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 183 LHWIA*GLSGTAYCSCLVINLTCN*ASKASPDILYYN 73
LH + G G Y CL I+LTC S + Y N
Sbjct: 727 LHSFSQGGGGAIYAECLKIHLTCQNVSVVNSSTAYAN 763
>SB_19442| Best HMM Match : Beach (HMM E-Value=0)
Length = 796
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 516 GHTSPVKAVSWVSFQG---DQATFVSGSHDQTAILWVWN 623
GH+ V + + QG A VSGS D T ++W W+
Sbjct: 423 GHSDVVTCLVYSRHQGLAGGDAIVVSGSRDATVLVWHWS 461
>SB_5842| Best HMM Match : WD40 (HMM E-Value=6.7e-21)
Length = 759
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 483 EHKRTTQTSIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 614
E +R T TS GH+ KAV VSF D F+S +D+ LW
Sbjct: 121 EVQRRTFTSY-GHS---KAVRDVSFNNDGTQFLSAGYDRYVKLW 160
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 421 AVQAHSSWILSGSYDNSLHIWS 486
A+ S+I+SGS DN++ +WS
Sbjct: 232 AIYPFGSYIMSGSSDNTIRVWS 253
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 661 VGHDKGIECLSVSADGNRFASGT 729
VGH KG+ L+V+ADG+ SG+
Sbjct: 1056 VGHSKGVYGLAVTADGSCVVSGS 1078
>SB_38417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/110 (21%), Positives = 43/110 (39%)
Frame = +1
Query: 247 REGVIFDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAV 426
R+ D+ + C S L + G S VE PT D S +
Sbjct: 303 RDTGTLDWCFTNKSKCLSTPIQLPKLGTSDHYCFLVENNRPRIKPTKTVVTKRDTRASCI 362
Query: 427 QAHSSWILSGSYDNSLHIWSTKGQHKLAYQVIHHQ*KQYHGCPSRVIKLH 576
++ WI S S+D ++ S + + + Y+ I ++ P R +++H
Sbjct: 363 RSFGQWITSYSWDELHNLTSCREKFEWFYRKIMEAIDKF--LPMRSVRMH 410
>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +1
Query: 280 GELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGS 459
G + + L+ H+ G ST+ TL+V E H V + H ++SGS
Sbjct: 360 GGVWSSQLSGHIIVSG-STDRTLKVWNAET--GYCMHTLYGHTSTVRCMDMHEEVVVSGS 416
Query: 460 YDNSLHIWST 489
D +L +W T
Sbjct: 417 RDGTLRVWDT 426
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 355 EYLERFPAPTPQDCLM----HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAYQVI 522
++L + P + C+ H + V ++Q ++I+SGS D S+ +W + L + ++
Sbjct: 458 DFLVKVWDPETEQCIHTLQGHTNRVYSLQFDGTYIVSGSLDTSIRVWHAETGQCL-HTLV 516
Query: 523 HHQ 531
HQ
Sbjct: 517 GHQ 519
>SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 243
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 516 GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRG 665
GHT + V Q D VSGS D+T + VW++ R ++T G
Sbjct: 24 GHTQGISCV-----QFDDTRIVSGSSDKT--IKVWDLSREDTSAVLTLAG 66
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 403 HDDWVSAVQA--HSSWILSGSYDNSLHIWSTK 492
H +WVS V S I+S SYD ++ IW +
Sbjct: 789 HKNWVSGVLVTPDSKRIISSSYDKTVKIWDVE 820
>SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 870
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 516 GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRG 665
GHT + V Q D VSGS D+T + VW++ R ++T G
Sbjct: 651 GHTQGISCV-----QFDDTRIVSGSSDKT--IKVWDLSREDTSAVLTLAG 693
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 403 HDDWVSAVQAHSSWIL--SGSYDNSLHIWSTKGQHKLAYQVIHHQ 531
H DWV V S L SGS D ++ +W KL H +
Sbjct: 1457 HSDWVMDVAFSSDGALLTSGSRDRTVRVWDCAAAEKLKKARFHSE 1501
>SB_26977| Best HMM Match : WD40 (HMM E-Value=1.9e-10)
Length = 345
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 664 GHDKGIECLSVSADGNRFASGT 729
GHD I CL VS DG +G+
Sbjct: 301 GHDNRISCLKVSPDGTGICTGS 322
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,948,999
Number of Sequences: 59808
Number of extensions: 669393
Number of successful extensions: 1577
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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