Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0423
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    24   1.1  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    23   3.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   3.5  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.0  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 415 SLSKCLNIIENSFRASSLTPEWFL-ACICCSRLCCMRIESWSSWSHC 278
           +++KC    ++  + S +TP  FL  C CC R   +R E   + +HC
Sbjct: 55  AVNKCEGSCKSQVQPSVITPTGFLKECYCC-RESFLR-ERTITLTHC 99


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 356 GMVPGLYLLLEVVLHAHREL 297
           GM+ G YL+L+ +L A R L
Sbjct: 21  GMLYGEYLMLDKILEAQRLL 40


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 356 GMVPGLYLLLEVVLHAHREL 297
           GM+ G YL+L+ +L A R L
Sbjct: 21  GMLYGEYLMLDKILEAQRLL 40


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 356 GMVPGLYLLLEVVLHAHREL 297
           GM+ G YL+L+ +L A R L
Sbjct: 21  GMLYGEYLMLDKILEAQRLL 40


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 170 VLRTLVGAASPTVVPGNPCPPS 105
           ++++LV +  P  VPG  C P+
Sbjct: 319 IVQSLVNSMKPKEVPGPCCVPT 340


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 476 VVPEGSQTRLEL 441
           VVPEGS+T +E+
Sbjct: 168 VVPEGSRTPIEI 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,939
Number of Sequences: 336
Number of extensions: 3711
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)