BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0423
(755 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease pr... 25 3.3
AF269153-1|AAF91398.1| 109|Anopheles gambiae labial homeotic pr... 24 5.8
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 23 7.7
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 7.7
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 7.7
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 23 7.7
>AJ276487-1|CAB90819.1| 375|Anopheles gambiae serine protease
protein.
Length = 375
Score = 24.6 bits (51), Expect = 3.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 429 LNHHEFKSCLRALGYDLPM 485
+NH K C + GYD+P+
Sbjct: 169 MNHRGSKDCKQVKGYDVPI 187
>AF269153-1|AAF91398.1| 109|Anopheles gambiae labial homeotic
protein protein.
Length = 109
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 626 DRERVPXHHRAPGPAPTSPRKNCYANLTKGDGRT 727
D RVP H P+ SP ++ + GRT
Sbjct: 25 DPLRVPNHTTVVAPSAVSPHQSSFMINNNSTGRT 58
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.4 bits (48), Expect = 7.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TCPWLKRDNPIRV*IYTQY 531
T W K +P+R IYT+Y
Sbjct: 2181 TAHWQKATSPLRNGIYTEY 2199
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.4 bits (48), Expect = 7.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 475 TCPWLKRDNPIRV*IYTQY 531
T W K +P+R IYT+Y
Sbjct: 2191 TAHWQKATSPLRNGIYTEY 2209
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 7.7
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -1
Query: 236 GSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVPGNPCPPS 105
GSD G L G + + + GAA+PT P P+
Sbjct: 1144 GSDGGAGSPAELSGNRERRSPSIPNSNAGAATPTATTAAPLAPT 1187
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 23.4 bits (48), Expect = 7.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 352 WFLACICCSRLC 317
W L +CCSR C
Sbjct: 35 WMLCEVCCSRKC 46
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,702
Number of Sequences: 2352
Number of extensions: 16613
Number of successful extensions: 59
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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