Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0423
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 179 2e-45
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 62 3e-10
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 36 0.041
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 36 0.041
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 31 0.67
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 31 0.67
U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical pr... 31 0.88
AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-lik... 31 0.88
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 30 2.0
Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical... 29 3.6
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 3.6
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 29 3.6
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 28 6.2
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 6.2
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 6.2
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 6.2
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 28 6.2
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 28 6.2
U21321-3|AAG00052.2| 655|Caenorhabditis elegans Hypothetical pr... 28 6.2
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 28 6.2
AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally sym... 28 6.2
AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally sym... 28 6.2
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 28 8.2
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.2
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 28 8.2
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 28 8.2
AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical ... 28 8.2
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 179 bits (436), Expect = 2e-45
Identities = 85/129 (65%), Positives = 100/129 (77%)
Frame = +3
Query: 267 GTSAQWDQLDQLSMRMQHNLEQQIQARNHSGVSEDALKEFSMMFKHFDKDRSGRLNHHEF 446
G + WDQLDQL+MRMQHNLEQQIQARN SGVSE+AL+EFSMMFKHFDK+++GRL+H +F
Sbjct: 2243 GIAQAWDQLDQLAMRMQHNLEQQIQARNQSGVSEEALREFSMMFKHFDKEKTGRLDHQQF 2302
Query: 447 KSCLRALGYDLPMVEEGQPDPSLNLYSVS*IRTATAKYPFKSTWAFMISKETENVHSSEE 626
KSCLRALGYDLPMV+EGQP+P + AFMISKETEN+ SSEE
Sbjct: 2303 KSCLRALGYDLPMVDEGQPEPEFQRILDIVDPNRDGYVTLQEYMAFMISKETENIQSSEE 2362
Query: 627 IENAFRAIT 653
IE AFRA++
Sbjct: 2363 IEMAFRALS 2371
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +2
Query: 2 SKEAQRQEENDKLRKEFAKHANTFHXWLTETRTSMMEGTGSLEQQLATLRQRASXXXXXX 181
++E QRQEENDKLR+EFAK AN FH WLT TR MME G+LE+QL + ++A
Sbjct: 2154 AREHQRQEENDKLRREFAKLANAFHAWLTNTRQEMMEAGGTLEEQLDAVERKAKEIKANK 2213
Query: 182 XXXXXXXXXXXXXXXXXILDNRYT 253
ILDNRYT
Sbjct: 2214 GQLRQIEEKGAMLERNLILDNRYT 2237
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 62.5 bits (145), Expect = 3e-10
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Frame = +3
Query: 243 TATRAQHRGTSAQWDQLDQLSMRMQHNLEQQIQARNHSGVSEDALKEFSMMFKHFDKDRS 422
T + A G + Q +L M ++EQ I RNH+GV+E L EF + F +FD++++
Sbjct: 187 TFSSATPHGVLVEMCQCLELMSSMLRSVEQSIADRNHNGVTEKQLHEFKLAFDYFDQEKN 246
Query: 423 GRLNHHEFKSCLRALGYDLPMVEEGQPDPSLNLYSVS*IRTATAKYPFKSTWAFMISKET 602
G L++ F+ CL++ GY+ + E +++L S Y +M+ ET
Sbjct: 247 GWLDYEHFELCLKSQGYNFSV--ESTLKETMSLLDPS-------TYEKHDYMRYMVKHET 297
Query: 603 ENV-HSSEEIENAFRAITAHQ 662
N+ IE+A + + A +
Sbjct: 298 TNILDDHSAIEDALKNLDARK 318
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 61.7 bits (143), Expect = 5e-10
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Frame = +3
Query: 255 AQHRGTSAQWDQLDQLSMRMQHNLEQQIQARNHSGVSEDALKEFSMMFKHFDKDRSGRLN 434
A G + Q +L M ++EQ I RNH+GV+E L EF + F +FD++R+G L+
Sbjct: 1937 ATPHGVLVEMCQCLELMSSMLRSVEQSIADRNHNGVTEKQLHEFELAFDYFDRERNGWLD 1996
Query: 435 HHEFKSCLRALGYDLPMVEEGQPDPSLNLYSVS*IRTATAKYPFKSTWAFMISKETENV- 611
+ F+ CL++ GY+ E ++ L S T +M+ ET N+
Sbjct: 1997 YKHFELCLKSQGYNFS--AENTLKETMTLLDPS----TTGHIQKHDYVRYMVKHETTNIL 2050
Query: 612 HSSEEIENAFRAITAHQ 662
IE+A + + A +
Sbjct: 2051 DDHSAIEDALKNLDARK 2067
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical protein
W04D2.1b protein.
Length = 894
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/125 (29%), Positives = 66/125 (52%)
Frame = +3
Query: 282 WDQLDQLSMRMQHNLEQQIQARNHSGVSEDALKEFSMMFKHFDKDRSGRLNHHEFKSCLR 461
W+ L + + E Q+ R+ G+SE+ + EF F HFDK+R+G L+ + +SCL
Sbjct: 723 WETLLTSINKTINEFENQVLLRDSKGISEEQIAEFRASFSHFDKERAG-LDPEQLRSCLI 781
Query: 462 ALGYDLPMVEEGQPDPSLNLYSVS*IRTATAKYPFKSTWAFMISKETENVHSSEEIENAF 641
++GY + EG + L V R + PF++ FM +KE + + E++ ++F
Sbjct: 782 SVGYTIRPGREGDAELHRVLAHVDPNR--MGRVPFEAFLDFM-TKENSDQDTVEQMIDSF 838
Query: 642 RAITA 656
R + +
Sbjct: 839 RILAS 843
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 8 EAQRQEENDKLRKEFAKHANTFHXWLTETRTSMME----GTGSLEQQLATLR 151
E +RQ+ N++LR FA+ AN WL ++ G G LE + LR
Sbjct: 627 ELKRQQNNERLRTIFAEKANQVGPWLERELEQVLAIGLGGRGRLEDAIQQLR 678
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical protein
W04D2.1a protein.
Length = 920
Score = 60.9 bits (141), Expect = 1e-09
Identities = 37/125 (29%), Positives = 66/125 (52%)
Frame = +3
Query: 282 WDQLDQLSMRMQHNLEQQIQARNHSGVSEDALKEFSMMFKHFDKDRSGRLNHHEFKSCLR 461
W+ L + + E Q+ R+ G+SE+ + EF F HFDK+R+G L+ + +SCL
Sbjct: 749 WETLLTSINKTINEFENQVLLRDSKGISEEQIAEFRASFSHFDKERAG-LDPEQLRSCLI 807
Query: 462 ALGYDLPMVEEGQPDPSLNLYSVS*IRTATAKYPFKSTWAFMISKETENVHSSEEIENAF 641
++GY + EG + L V R + PF++ FM +KE + + E++ ++F
Sbjct: 808 SVGYTIRPGREGDAELHRVLAHVDPNR--MGRVPFEAFLDFM-TKENSDQDTVEQMIDSF 864
Query: 642 RAITA 656
R + +
Sbjct: 865 RILAS 869
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 8 EAQRQEENDKLRKEFAKHANTFHXWLTETRTSMME----GTGSLEQQLATLR 151
E +RQ+ N++LR FA+ AN WL ++ G G LE + LR
Sbjct: 653 ELKRQQNNERLRTIFAEKANQVGPWLERELEQVLAIGLGGRGRLEDAIQQLR 704
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 35.5 bits (78), Expect = 0.041
Identities = 27/95 (28%), Positives = 45/95 (47%)
Frame = +3
Query: 360 VSEDALKEFSMMFKHFDKDRSGRLNHHEFKSCLRALGYDLPMVEEGQPDPSLNLYSVS*I 539
++E+ + EF F FDKD G + E + +R+LG + E + +N V
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN---PTEAELQDMIN--EVDAD 59
Query: 540 RTATAKYPFKSTWAFMISKETENVHSSEEIENAFR 644
T +P T M++++ ++ S EEI AFR
Sbjct: 60 GNGTIDFPEFLT---MMARKMKDTDSEEEIREAFR 91
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 35.5 bits (78), Expect = 0.041
Identities = 27/95 (28%), Positives = 45/95 (47%)
Frame = +3
Query: 360 VSEDALKEFSMMFKHFDKDRSGRLNHHEFKSCLRALGYDLPMVEEGQPDPSLNLYSVS*I 539
++E+ + EF F FDKD G + E + +R+LG + E + +N V
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN---PTEAELQDMIN--EVDAD 59
Query: 540 RTATAKYPFKSTWAFMISKETENVHSSEEIENAFR 644
T +P T M++++ ++ S EEI AFR
Sbjct: 60 GNGTIDFPEFLT---MMARKMKDTDSEEEIREAFR 91
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +1
Query: 103 NDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPGQP 246
N G G PG DA S+ Q+ P+ P PG PGQP
Sbjct: 199 NPGQAGAPGQPGADAQSESIPGAPGQAGPQGPPGPAGSPGAPGGPGQP 246
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 369 DALKEFSMMFKHFDKDRSGRLNHHEFKSCLRALGYDLPMVEE 494
+ L+EF+ FK FDKD + +N E +R LG + P EE
Sbjct: 20 EELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLN-PTEEE 60
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -2
Query: 421 DRSLSKCLNIIENSFRASSLTPEWFLACICCSRLCCMRIESWSSWSHCAL-VPRCCARV 248
+R + K L+ IE + L EW A + RLC ++ + C L VP A +
Sbjct: 442 ERDIEKMLDKIEEDTKEDMLRSEWRFAAMAVDRLCLYVFSAFITMITCGLIVPHILANI 500
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 354 SGVSEDALKEFSMMFKHFDKDRSGRLNHHEFKSCLRALG 470
S ++E+ + EF F FDKD +G ++ E +RALG
Sbjct: 21 SQLTEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALG 59
>U64601-9|AAB04578.1| 314|Caenorhabditis elegans Hypothetical
protein M03F4.7a protein.
Length = 314
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 354 SGVSEDALKEFSMMFK-HFDKDRSGRLNHHEFKSCLRALGYD 476
+G D ++ MFK H DKD G+LN E + + +G+D
Sbjct: 220 NGKEPDWVQSEREMFKEHRDKDGDGKLNQEEMRDWIMPVGFD 261
>AF228528-1|AAF34189.1| 314|Caenorhabditis elegans calumenin-like
protein protein.
Length = 314
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 354 SGVSEDALKEFSMMFK-HFDKDRSGRLNHHEFKSCLRALGYD 476
+G D ++ MFK H DKD G+LN E + + +G+D
Sbjct: 220 NGKEPDWVQSEREMFKEHRDKDGDGKLNQEEMRDWIMPVGFD 261
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 467 RVRPAHG*RGTTRSEFESILSIVDPNRDGQVSLQEYMGLHDQQGDR 604
+V A G R TT EF+++LS D +GQ+ L E + G++
Sbjct: 70 KVEAACG-RSTTLKEFQTLLSHFDREGNGQIMLMELKSMLQNGGEK 114
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 375 LKEFSMMFKHFDKDRSGRLNHHEFKSCLR 461
LKEF + HFD++ +G++ E KS L+
Sbjct: 81 LKEFQTLLSHFDREGNGQIMLMELKSMLQ 109
>Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical
protein ZK455.4 protein.
Length = 618
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 558 YPFKSTWAFMISKETENVHSSEEIENAFRAITAHQDRPLRH 680
Y FK F++ + +V + EEI AF A H D+PL H
Sbjct: 119 YAFKDEVVFVLER---SVFTPEEICGAFIANCGHSDKPLTH 156
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +2
Query: 581 LHDQQGDRERALLRGD---RERVPXHHRAPGPAPTSPRKNC 694
L QQ ERA D RER P P P PR NC
Sbjct: 61 LKRQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNC 101
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +2
Query: 581 LHDQQGDRERALLRGD---RERVPXHHRAPGPAPTSPRKNC 694
L QQ ERA D RER P P P PR NC
Sbjct: 61 LKRQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNC 101
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +2
Query: 581 LHDQQGDRERALLRGD---RERVPXHHRAPGPAPTSPRKNC 694
L QQ ERA D RER P P P PR NC
Sbjct: 61 LKRQQSAEERARAEADARRRERCRNRRPQPTPGPPPPRNNC 101
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +3
Query: 252 RAQHRGTSAQWDQLDQLSMRMQHNLEQQI---QARNHSGVSE--DALKEFSMMFKH 404
+A+ T + L+ L R + +L + QA+NH+GVS + LK +F+H
Sbjct: 118 KAERNNTRLLLEHLECLVSRHERSLRMTVMKRQAQNHAGVSSEVEVLKALKSLFEH 173
>AL110484-28|CAB54395.2| 419|Caenorhabditis elegans Hypothetical
protein Y38E10A.4 protein.
Length = 419
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/22 (45%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +1
Query: 442 SSSRVCE-PSGTTCPWLKRDNP 504
S+S +C+ P+GT+CPW++ + P
Sbjct: 273 SNSFLCKRPAGTSCPWVEPETP 294
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 275 ASPTVLCPCS--GCPGSDAPPGRRLTLQGVSGQLCGRVLRTLVGAASPTVVPGNPCPP 108
+S + CP G PG D PPG + G +G G + + +GA SP PG PP
Sbjct: 135 SSGCITCPAGPMGSPGPDGPPG----VPGATGN-PGSLGESSLGAGSPG-PPGGVGPP 186
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +3
Query: 252 RAQHRGTSAQWDQLDQLSMRMQHNLEQQI---QARNHSGVSE--DALKEFSMMFKH 404
+A+ T + L+ L R + +L + QA+NH+GVS + LK +F+H
Sbjct: 118 KAERNNTRLLLEHLECLVSRHERSLRMTVMKRQAQNHAGVSSEVEVLKALKSLFEH 173
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 103 NDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPGQ 243
N G G PG DA S Q+ P+ P PG PGQ
Sbjct: 199 NPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQ 245
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 103 NDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPGQ 243
N G G PG DA S Q+ P+ P PG PGQ
Sbjct: 199 NPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQ 245
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 103 NDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPGQ 243
N G G PG DA S Q+ P+ P PG PGQ
Sbjct: 199 NPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGAPGGPGQ 245
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 342 ARNHSGVSEDALKEFSMMFKHFDKDRSGRLNHHEFK 449
A +++ VS+ +FKH+D DR G ++ EF+
Sbjct: 410 APDNATVSKHISAMVDAVFKHYDHDRDGFISQEEFQ 445
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 5 KEAQRQEENDKLRKEFAKHAN 67
K ++END+LR+EF ++AN
Sbjct: 275 KSLSLEDENDRLRREFERYAN 295
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 5 KEAQRQEENDKLRKEFAKHAN 67
K ++END+LR+EF ++AN
Sbjct: 348 KSLSLEDENDRLRREFERYAN 368
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 5 KEAQRQEENDKLRKEFAKHAN 67
K ++END+LR+EF ++AN
Sbjct: 348 KSLSLEDENDRLRREFERYAN 368
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 5 KEAQRQEENDKLRKEFAKHAN 67
K ++END+LR+EF ++AN
Sbjct: 348 KSLSLEDENDRLRREFERYAN 368
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 369 DALKEFSM--MFKHFDKDRSGRLNHHEFKSCLRALG 470
D+LKE + +F+ FDK+ GR+ E + L LG
Sbjct: 2 DSLKEAEIREVFREFDKNGDGRITRQELEVALLQLG 37
>U21321-3|AAG00052.2| 655|Caenorhabditis elegans Hypothetical
protein ZK177.4 protein.
Length = 655
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 10/43 (23%)
Frame = +2
Query: 65 NTF-HXWLTETRTSM---------MEGTGSLEQQLATLRQRAS 163
+TF + W TE +TS M+ TGSLEQQLA L+ A+
Sbjct: 426 STFDNIWSTENKTSFGRDSVSQPPMKSTGSLEQQLAALKPLAA 468
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 351 HSGVSEDALKEFSMMFKHFDKDRSGRLNHHEFKSCL 458
H+ E + + M FK D+D G+LN E S L
Sbjct: 132 HNKEEESLIAQDKMYFKQADEDNDGKLNLEELASFL 167
>AC006642-9|AAX88828.1| 339|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform b protein.
Length = 339
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 302 LYAHAAQPRAADTSQEPFRCKRRRPEGVLDDVQALR--QGSIWTPQPPR 442
L H + + PF RR P + DD LR G +TP PPR
Sbjct: 127 LRTHVTTKEELEAAWRPFASNRRPPADIPDDAIVLRGAGGPYYTP-PPR 174
>AC006642-8|AAF39827.2| 365|Caenorhabditis elegans Laterally
symmetric (defectivein lateral asymmetry) protein 2,
isoform a protein.
Length = 365
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 302 LYAHAAQPRAADTSQEPFRCKRRRPEGVLDDVQALR--QGSIWTPQPPR 442
L H + + PF RR P + DD LR G +TP PPR
Sbjct: 153 LRTHVTTKEELEAAWRPFASNRRPPADIPDDAIVLRGAGGPYYTP-PPR 200
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Frame = +1
Query: 109 GGHGFPGTTVGDAAPTSVRSTR-----PQS*PETP--XXXXXXPGGASDPGQPL 249
GGHG PG A+P R+ PQ P P PGG PGQ +
Sbjct: 162 GGHGMPGMPGLGASPCQPRTQSQCQQCPQGPPGPPGLNGQPGLPGGMGPPGQSM 215
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 73 PPXAHRDSHINDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPGQP 246
PP A D+ G +G PG GDA P ++ P+ P PG +PG+P
Sbjct: 163 PPGAPGDA----GTNGAPGAPGGDAPP-------GEAGPKGPPGPPGSPGAPGEPGRP 209
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 354 SGVSEDALKEFSMMFKHFDKDRSGRLNHHEFKSCLRALG 470
S S ++ FS +FK +D+D+ ++ +E K + LG
Sbjct: 536 SEFSRKQIQYFSGIFKKYDEDQDSYIDFNELKRMMEKLG 574
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = +1
Query: 76 PXAHRDSHINDGGHGFPGTTVGDAAPTSVRSTRPQS*PETPXXXXXXPGGASDPGQP 246
P R + + G G PG DA S Q+ P+ P PG PG P
Sbjct: 174 PKGQRGAPGHPGQAGAPGQPGVDAQSQSTPGAPGQAGPQGPPGSSGAPGAPGGPGFP 230
>AF078783-5|AAC26922.1| 236|Caenorhabditis elegans Hypothetical
protein H10E21.4 protein.
Length = 236
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 515 ESILSIVDPNRDGQVSLQEY 574
+ ILSI D NRDGQ++ E+
Sbjct: 119 DGILSIADTNRDGQLTYAEF 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,677,289
Number of Sequences: 27780
Number of extensions: 370884
Number of successful extensions: 1767
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1757
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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