Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0421
         (825 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9ZHL0 Cluster: Large supernatant protein 2; n=4; Haemo...    35   2.8  
UniRef50_A7HNP1 Cluster: Putative uncharacterized protein; n=1; ...    34   5.0  
UniRef50_Q5K2C1 Cluster: Putative trehalose 6-phosphate synthase...    34   5.0  
UniRef50_A2E769 Cluster: Putative uncharacterized protein; n=2; ...    34   5.0  

>UniRef50_Q9ZHL0 Cluster: Large supernatant protein 2; n=4;
            Haemophilus ducreyi|Rep: Large supernatant protein 2 -
            Haemophilus ducreyi
          Length = 4919

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = -3

Query: 328  SVLKPLINSDSXXXXXXXXXXXISLCK-QRDNVVVNVLWYTHSQTNNQSILIYHIRLA 158
            +++K LI+S S            +L K Q+DN+  +++WY  ++ N Q +L+  + LA
Sbjct: 1516 ALVKKLIDSASIQAKDLNLKVGEALTKEQKDNLKEDIVWYVKTEVNGQEVLVPQVYLA 1573


>UniRef50_A7HNP1 Cluster: Putative uncharacterized protein; n=1;
           Fervidobacterium nodosum Rt17-B1|Rep: Putative
           uncharacterized protein - Fervidobacterium nodosum
           Rt17-B1
          Length = 192

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +3

Query: 591 WLVVQT*DGAMIILWVLLISDSKNAKKEETCDDSDPEEEIVKTGLIK 731
           WLVV +  G++++LW L I  + N K E++  D + E  I   G ++
Sbjct: 6   WLVVFSAIGSLLLLWSLFIVQTFNKKHEKSAIDEEEERLIELMGRVR 52


>UniRef50_Q5K2C1 Cluster: Putative trehalose 6-phosphate synthase;
           n=5; Aphelenchus avenae|Rep: Putative trehalose
           6-phosphate synthase - Aphelenchus avenae (Mycophagous
           nematode worm)
          Length = 1303

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = -2

Query: 482 LGFFLHITIVFFLNDNFFVFTRVCMFVIYRG 390
           +GFFLHI   F   DNFF   R+C F I RG
Sbjct: 533 IGFFLHIP--FLPPDNFFTKYRLCAFPIMRG 561


>UniRef50_A2E769 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 512

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +3

Query: 42  NFVNIRSFNVGNLNYQTLILLFLKTYQFFVCLFNQLMLNAKRM*YMSML*LFVCE 206
           N +   S N+ N +YQ  I LFLK+Y   +    QL+ N K + Y S L + +C+
Sbjct: 53  NIIENSSDNIQN-SYQNYIALFLKSYTVVIKEIKQLIENTK-LNYQSPLGIIICD 105


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,179,099
Number of Sequences: 1657284
Number of extensions: 13926814
Number of successful extensions: 30111
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30086
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71324098314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)