Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0421
         (825 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1234|ABI31296.1|  763|Drosophila melanogaster CG13778-P...    30   3.3  
AE014134-1233|AAF52480.3|  763|Drosophila melanogaster CG13778-P...    30   3.3  
AB040816-1|BAA94341.1|  751|Drosophila melanogaster menin protein.     30   3.3  

>AE014134-1234|ABI31296.1|  763|Drosophila melanogaster CG13778-PC,
           isoform C protein.
          Length = 763

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 657 KNAKKEETCDDSDPEEEIVKTGLIKNCYEKL 749
           K AKKEET DD DP E ++K  +I    +K+
Sbjct: 636 KEAKKEETSDDYDPFEIMLKRPVITLYSQKM 666


>AE014134-1233|AAF52480.3|  763|Drosophila melanogaster CG13778-PA,
           isoform A protein.
          Length = 763

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 657 KNAKKEETCDDSDPEEEIVKTGLIKNCYEKL 749
           K AKKEET DD DP E ++K  +I    +K+
Sbjct: 636 KEAKKEETSDDYDPFEIMLKRPVITLYSQKM 666


>AB040816-1|BAA94341.1|  751|Drosophila melanogaster menin protein.
          Length = 751

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +3

Query: 657 KNAKKEETCDDSDPEEEIVKTGLIKNCYEKL 749
           K AKKEET DD DP E ++K  +I    +K+
Sbjct: 624 KEAKKEETSDDYDPFEIMLKRPVITLYSQKM 654


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,679,100
Number of Sequences: 53049
Number of extensions: 627442
Number of successful extensions: 1250
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)