Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0420
(796 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 200 1e-51
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 1e-51
SB_56| Best HMM Match : Actin (HMM E-Value=0) 200 1e-51
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 198 6e-51
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 6e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 4e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 5e-21
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 97 1e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 1e-19
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 78 7e-15
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 67 2e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 7e-07
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 50 3e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 36 0.038
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 35 0.087
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 34 0.12
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 34 0.12
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 34 0.12
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 34 0.15
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 32 0.47
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 32 0.62
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 32 0.62
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 32 0.62
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 32 0.62
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 32 0.62
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 32 0.62
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.81
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 1.4
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 1.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.5
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.5
SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 4.3
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 4.3
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 29 4.3
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 5.7
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 29 5.7
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.7
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 5.7
SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 29 5.7
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 29 5.7
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.7
SB_242| Best HMM Match : AFP (HMM E-Value=0.45) 29 5.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 200 bits (488), Expect = 1e-51
Identities = 112/177 (63%), Positives = 116/177 (65%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT* 615
QIMFETFN+PAMYVAIQAVLSLYAS P P
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 616 PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TDYLMKI + + TTAEREIV + C ALDFEQEM SS
Sbjct: 182 AGRDLTDYLMKILTERGYSFT-TTAEREIVRDIKEKLCYV-ALDFEQEMTTAASSSS 236
Score = 131 bits (317), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 74 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 254 TK 259
+K
Sbjct: 61 SK 62
Score = 99.1 bits (236), Expect = 4e-21
Identities = 54/77 (70%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + GYSFT
Sbjct: 147 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT-ERGYSFT--T 203
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCYV
Sbjct: 204 TAEREIVRDIKEKLCYV 220
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 200 bits (487), Expect = 1e-51
Identities = 112/177 (63%), Positives = 116/177 (65%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT* 615
QIMFETFN+PAMYVAIQAVLSLYAS P P
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDL 181
Query: 616 PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TDYLMKI + + TTAEREIV + C ALDFEQEM SS
Sbjct: 182 AGRDLTDYLMKILTERGYSFT-TTAEREIVRDIKEKLCYV-ALDFEQEMETAASSSS 236
Score = 127 bits (306), Expect = 1e-29
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +2
Query: 74 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 253
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 254 TK 259
+K
Sbjct: 61 SK 62
Score = 98.3 bits (234), Expect = 6e-21
Identities = 53/77 (68%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDL + + GYSFT
Sbjct: 147 GRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILT-ERGYSFT--T 203
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCYV
Sbjct: 204 TAEREIVRDIKEKLCYV 220
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 200 bits (487), Expect = 1e-51
Identities = 112/177 (63%), Positives = 116/177 (65%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT* 615
QIMFETFN+PAMYVAIQAVLSLYAS P P
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 616 PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TDYLMKI + + TTAEREIV + C ALDFEQEM SS
Sbjct: 181 AGRDLTDYLMKILTERGYSFT-TTAEREIVRDIKEKLCYV-ALDFEQEMQTAASSSS 235
Score = 125 bits (302), Expect = 4e-29
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2
Query: 80 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 99.1 bits (236), Expect = 4e-21
Identities = 54/77 (70%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + GYSFT
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT-ERGYSFT--T 202
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCYV
Sbjct: 203 TAEREIVRDIKEKLCYV 219
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 198 bits (482), Expect = 6e-51
Identities = 112/177 (63%), Positives = 116/177 (65%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT* 615
QIMFETFN+PAMYVAIQAVLSLYAS P P
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
Query: 616 PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TDYLMKI + + TTAEREIV + ALDFEQEMA SS
Sbjct: 181 AGRDLTDYLMKILTERGYSFT-TTAEREIVR-DIKEKLAYVALDFEQEMATAAASSS 235
Score = 124 bits (299), Expect = 8e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +2
Query: 80 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 95.5 bits (227), Expect = 4e-20
Identities = 53/77 (68%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDL + + GYSFT
Sbjct: 146 GRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT-ERGYSFT--T 202
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKL YV
Sbjct: 203 TAEREIVRDIKEKLAYV 219
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (449), Expect = 6e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS 510
QIMFETFN+PAMYVAIQAVLSLYAS
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYAS 146
Score = 127 bits (306), Expect = 1e-29
Identities = 56/62 (90%), Positives = 61/62 (98%)
Frame = +2
Query: 74 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 253
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 254 TK 259
+K
Sbjct: 61 SK 62
Score = 50.0 bits (114), Expect(2) = 1e-08
Identities = 23/27 (85%), Positives = 25/27 (92%), Gaps = 2/27 (7%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYE--GYA 584
GRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 147 GRTTGIVMDSGDGVSHTVPIYEERGYS 173
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +1
Query: 682 TTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TTAEREIV + C ALDFEQEM SS
Sbjct: 176 TTAEREIVRDIKEKLCYV-ALDFEQEMQTAASSSS 209
Score = 27.1 bits (57), Expect(2) = 1e-08
Identities = 16/25 (64%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +3
Query: 666 GYSFTYHRRAGNRFV-DIKEKLCYV 737
GYSFT A V DIKEKLCYV
Sbjct: 171 GYSFT--TTAEREIVRDIKEKLCYV 193
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 125 bits (302), Expect = 4e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +2
Query: 80 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ+K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 98.3 bits (234), Expect = 6e-21
Identities = 53/77 (68%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDL + + GYSFT
Sbjct: 109 GRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILT-ERGYSFT--T 165
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCYV
Sbjct: 166 TAEREIVRDIKEKLCYV 182
Score = 68.5 bits (160), Expect = 6e-12
Identities = 53/123 (43%), Positives = 59/123 (47%)
Frame = +1
Query: 418 NREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTP 597
N + M +IMFETFN+PAMYVAIQAVLSLYAS P P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 598 SCVWT*PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLH 777
TDYLMKI + + TTAEREIV + C ALDFEQEM
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFT-TTAEREIVRDIKEKLCYV-ALDFEQEMQTAAS 195
Query: 778 PSS 786
SS
Sbjct: 196 SSS 198
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTF 345
KRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 98.7 bits (235), Expect = 5e-21
Identities = 43/84 (51%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 435
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 436 QIMFETFNTPAMYVAIQAVLSLYA 507
++MFE + +Y+AIQAVL+LYA
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYA 148
Score = 74.9 bits (176), Expect = 7e-14
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+ + + GY+F H
Sbjct: 150 GLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIK-LMLLRGYAFN-HT 207
Query: 690 RAGNRFVDIKEKLCYVG 740
+KEKLCYVG
Sbjct: 208 ADFETVRMMKEKLCYVG 224
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 92 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 250
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 97.1 bits (231), Expect = 1e-20
Identities = 53/77 (68%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDL + GYSFT
Sbjct: 25 GRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMK-LMTERGYSFT--T 81
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCYV
Sbjct: 82 TAEREIVRDIKEKLCYV 98
Score = 55.2 bits (127), Expect = 6e-08
Identities = 44/108 (40%), Positives = 52/108 (48%)
Frame = +1
Query: 439 IMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*P 618
IMFE FN+PA+YVAIQAVLSLYAS + P P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 619 VATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEM 762
TDYLMK+ + + TTAEREIV + C ALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFT-TTAEREIVRDIKEKLCYV-ALDFYQEI 106
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/62 (67%), Positives = 52/62 (83%)
Frame = +1
Query: 325 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 504
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 505 AS 510
AS
Sbjct: 2189 AS 2190
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/76 (55%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDL + GYSF
Sbjct: 2191 GRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHY-LQRLVTERGYSF--QS 2247
Query: 690 RAGNRFV-DIKEKLCY 734
A + + D+KE LCY
Sbjct: 2248 TAEQQIIRDLKETLCY 2263
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 199
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 78.2 bits (184), Expect = 7e-15
Identities = 31/42 (73%), Positives = 41/42 (97%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNR 635
GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++R
Sbjct: 172 GRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSR 213
Score = 76.2 bits (179), Expect = 3e-14
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +1
Query: 373 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 510
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYAT 171
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/76 (35%), Positives = 49/76 (64%)
Frame = +1
Query: 283 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 462
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 463 PAMYVAIQAVLSLYAS 510
PA ++ +VL+ +A+
Sbjct: 63 PAFFLCKNSVLTAFAN 78
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
GR+ G+V+DSG + VP+++GY L AI+R LAG
Sbjct: 79 GRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAG 115
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 199
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.6 bits (118), Expect = 7e-07
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +2
Query: 68 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 238
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 239 GDEAQTK 259
GD A K
Sbjct: 753 GDAAVAK 759
Score = 48.0 bits (109), Expect = 9e-06
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
G T G+ L SG + IYEG+ L H + L++ G L + G++FT
Sbjct: 776 GMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFT--S 833
Query: 690 RAGNRFV-DIKEKLCYV 737
+G + V DIKEK+CY+
Sbjct: 834 SSGWQIVNDIKEKICYL 850
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +3
Query: 519 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 629
TG V+DSGDGV+H +P+ EGY + I + +AGRD+
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDI 98
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1
Query: 253 DKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 390
DK T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 292 DKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.47
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 519 TGIVLDSGDGVSHTVPI 569
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 196 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 80
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 35.9 bits (79), Expect = 0.038
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Frame = +1
Query: 352 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
E APE V T AP + P+ +T + ET PA A++ +L ++VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 520 PVSCWTPATVSP--TPCPSTRDTHSPT--PSCVWT*PVATSTDYLMKIPHRAXATRSLTT 687
+ + TV+P T P+T T P W P TS P AT +
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTWA-PETTSAPETTVAPEITAATETTAA 1441
Query: 688 AEREIVSWTSRRSCVTSA 741
+ + T+ T A
Sbjct: 1442 PDITVAPKTTAAPVTTLA 1459
Score = 29.1 bits (62), Expect = 4.3
Identities = 29/103 (28%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
T E VAP + TE P+ T + ET P +A + + +V P
Sbjct: 205 TAAQETTVAPGT--TVATETTAAPETTTAPETTMALETTVAPEATMAPETTVVPDTTVEP 262
Query: 520 PVSCW---TPATVSPTPCPSTRDTHSPTPSCVWT*PVATSTDY 639
S T T P P+T +S TPS A TDY
Sbjct: 263 ETSTTLKPTDVTEKPEASPATPAEYSTTPSVQPELTEAPQTDY 305
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 35.1 bits (77), Expect = 0.066
Identities = 30/134 (22%), Positives = 50/134 (37%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
T E VAPE + E ++P+ T + ET TP VA + ++ +V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 520 PVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAERE 699
+ TV+P + T +P + P +T +P A + E
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAPETTMA---PESTEAPETTIVPETTVAPETTKAPETT 4296
Query: 700 IVSWTSRRSCVTSA 741
+ S T++ T A
Sbjct: 4297 VASKTTKTPETTFA 4310
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +1
Query: 352 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
E +APE E P ++ E + P+ + T + +T TP A + ++ A+V
Sbjct: 4264 ETTMAPESTEAPETTIVPETTVAPETTKAPETTVASKTTKTPETTFAPETTMAPEATVAE 4323
Query: 520 PVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATST 633
+ TV+P + T +P + V VA T
Sbjct: 4324 ETTMAPVTTVAPETTKAPESTEAPETTMVPETTVAPET 4361
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/98 (24%), Positives = 38/98 (38%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
T E VAPE + E+ L + +T + ET TP VA + + ++ P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 520 PVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATST 633
+ TV+P + T +P + VA T
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAPETTMAPETTVAAET 5010
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 352 ELRVAPE--EHP--VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
E +APE E P + E+ P+ MT + ET TP VA + + +++ P
Sbjct: 4372 ETTMAPESTEAPETTMAPESTEAPETTMAPMTTVASETTKTPDTPVAPETNMVAESTLAP 4431
Query: 520 PVSCWTPATVSPTPCPSTRDTHSP 591
+ TV+P + T SP
Sbjct: 4432 ETTMTPEITVAPKTTMAPETTVSP 4455
Score = 28.3 bits (60), Expect = 7.6
Identities = 29/119 (24%), Positives = 45/119 (37%)
Frame = +1
Query: 385 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPC 564
L E + P++ T I E+ P V +S ++ VPP + +TV+P
Sbjct: 2355 LAQETTMAPESTVVPPTTIAPESTEIPNSTVVPGTTISPKSTEVPPTTMTAESTVAPGTT 2414
Query: 565 PSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSA 741
+ T +P + VAT T P A + T E + T+ S T A
Sbjct: 2415 MAPESTVTPETTMAPESTVATGTTI---APETTLALETTTAPETTLPPETTMASESTLA 2470
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 34.7 bits (76), Expect = 0.087
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 508 SVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTT 687
S P S + + +PTP + +++PTPS T +T Y + + + + TT
Sbjct: 97 SYTPTTSYTSTTSYTPTPSYTPTPSYTPTPSYTSTTSYTPTTSYTPTPSYTSTTSYTSTT 156
Query: 688 AEREIVSWTSRRS 726
+ S+TS S
Sbjct: 157 SYTSTTSYTSTPS 169
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 520 PVSCWTPAT-VSPTPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAER 696
P + +TP T +PTP + +++PTPS T +T Y + + + T +
Sbjct: 64 PTTSYTPTTSYTPTPSYTPTTSYTPTPSYTSTTSYTPTTSYTSTTSYTPTPSYTPTPSYT 123
Query: 697 EIVSWTSRRS 726
S+TS S
Sbjct: 124 PTPSYTSTTS 133
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Frame = +1
Query: 520 PVSCWTPATVSPTPCPSTRDT--------HSPTPSCVWT*PVATSTDYLMKIPHRAXATR 675
P +TP T S TP PS T ++PTPS T ++T Y + + +
Sbjct: 112 PTPSYTP-TPSYTPTPSYTSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTSTPSY 170
Query: 676 SLTTAEREIVSWTSRRS 726
+ TT+ S+TS S
Sbjct: 171 TSTTSYTSTTSYTSTTS 187
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L CLC + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 119
L C+C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 274 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 426
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 358 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWT 537
++A + +P + E N K + +K+ Q M +T + + ++ +A +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 538 PATVSPTPCPSTRDTHSP-TPSCV 606
P PT P+ + T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 520 PVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAERE 699
P + +TP T S TP PS ++PTPS T ++T Y + + + TT+
Sbjct: 82 PTTSYTPTT-SYTPTPS----YTPTPSYTCTTSYTSTTSYTPTTSYTPTTSYTCTTSYTS 136
Query: 700 IVSWTSRRS 726
S+T S
Sbjct: 137 TTSYTPTTS 145
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.7 bits (66), Expect = 1.4
Identities = 33/134 (24%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Frame = +1
Query: 352 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVP 519
E VAPE L E P+ + +T P VAI++ L+L ++V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 520 PVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAERE 699
+ T TV+P + T +P + P T P A S E
Sbjct: 79 ETTVATETTVAPETTAAPESTLAPEITAA---PDTTMVPESTVAPDTTVAPESTVAPETT 135
Query: 700 IVSWTSRRSCVTSA 741
V T+ +T A
Sbjct: 136 AVPETTLAPGITVA 149
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 520 PVSCWTPAT--VSPTPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAE 693
P +TP T S T ST +++PTPS T T+T Y + + + TT+
Sbjct: 34 PTPSYTPTTSYTSTTSYTSTT-SYTPTPSYTPTTSYTTTTSYTSTTSYTTTTSYTPTTSY 92
Query: 694 REIVSWTSRRS 726
S+TS S
Sbjct: 93 TSTTSYTSTTS 103
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +1
Query: 508 SVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTT 687
S P S T + + T +T +++PT S T ++T Y + + + + TT
Sbjct: 61 SYTPTTSYTTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTT 120
Query: 688 AEREIVSWTSRRS 726
+ S+TS S
Sbjct: 121 SYTSTTSYTSTTS 133
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +1
Query: 451 TFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATS 630
T TP++ + QA S+ S S + V+P+ ST+ S TPS VA S
Sbjct: 1840 THLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASSTQAATSVTPSTQGMPSVAPS 1899
Query: 631 TDYLMKIPHRAXATRSLTTAEREIVSWT 714
T + T S+ ++ + S T
Sbjct: 1900 TQMTPSVASSTQVTPSVASSTQAAPSVT 1927
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 443 CSKHSTRPPCTSPSKPCSRCTRRSYHRYRAG 535
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 399 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 491
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 166 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTDKRGILTLKYPIEHGIVTNW--DDMEKIWHH 339
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 340 TFYN 351
T N
Sbjct: 497 TCPN 500
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 283 PIEHGIVTNWDDMEKIWHHTFYNE 354
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +1
Query: 451 TFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVATS 630
++NTP +++ +Q +S + VS W+ PC H+ +P + T V+TS
Sbjct: 228 SYNTPCLHIILQHAVSPHGLTTCRVSTWS----YNMPCLHIISQHAVSPHGLTTCRVSTS 283
Query: 631 T---DYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDF 750
+ L I A + L T + +W+ +C+ L +
Sbjct: 284 SYNMPCLHIISQHAVSPHGLPTC--RVSTWSYNMTCLHIILHY 324
>SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 482 SKPCSRCTRRSYH--RYRAGLRRRCLPHRAHLRGIRTPP 592
S PC+ C + H + L R PHR LRG +T P
Sbjct: 352 SPPCASCQQYDNHAMNFDVLLNGRSYPHRTPLRGNQTTP 390
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = -1
Query: 262 LFCLCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 98
+F CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 97 RGNFFVAHLELVK 59
G V L+ K
Sbjct: 520 HGQVDVLLLDFQK 532
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = -3
Query: 323 SMSSQLVTIPCSMGYLRVRIPLLSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHL 144
+++SQ VT M R +PL+S P + KSP V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 143 LRNRPCTYRS 114
+ P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 357 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVGRTTGIVLD 536
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 537 SGDGVSHTVPI 569
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.1 bits (62), Expect = 4.3
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Frame = +1
Query: 391 TEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTP 561
T+AP L PK T + ET + PA+ +A + + +V P + TV+P
Sbjct: 515 TDAPATTLAPKTTIAPETTVAQETTDAPAITMAPETSAAPETTVAPETNAAPETTVAPEI 574
Query: 562 CPSTRDTHSPTPSCVWT*PVATSTDYLMKI---PHRAXATRSLTTAEREIVSWTSRRSCV 732
+T T +P + VA T +I P A + E + T+ +
Sbjct: 575 TAATEITAAPEITAAPDTTVAPETTVAPEITVAPETTAAPETTVAPETTMAPETTVAAET 634
Query: 733 TSALD 747
T+A +
Sbjct: 635 TAAAE 639
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 152 QVDVLLLDFQK 162
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +1
Query: 379 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPT 558
PVL A P A + TQ + P ++ V + A PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 559 PCPSTRDTHSPTP 597
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 152 QVDVLLLDFQK 162
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 535 TPATVSPTPCPSTRDTHSPTPSCVWT*PVATST--DYLMKIPHRAXATRSLTT 687
T T +PT +T +T + TP+ T P AT+T + P+ T + TT
Sbjct: 175 TATTTTPTATTTTPNTTTNTPNATTTTPTATTTTPNATTTTPNTTTTTPNATT 227
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 185 QVDVLLLDFQK 195
>SB_105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2982
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 584 TPPRHPASGLSRSRPQQTTS*RFLTERRLLVHLPPPSGKSF-RGHQGEA 727
+PP P+S S +R + T + R T RR + P KSF RGH A
Sbjct: 944 SPPSTPSSSCSNARDRDTRAQRHQTLRR-TSSIGTPRKKSFARGHSSVA 991
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 102 QVDVLLLDFQK 112
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 774 QVDVLLLDFQK 784
>SB_11456| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 391
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 481 IQAVLSLYASVVPPVSCWTP-ATVSPTPCPSTRDTHSP 591
++ +L+A+VV V+CWTP A + S+ H P
Sbjct: 250 VKVTKTLFATVVGFVTCWTPIAVIDMLDAYSSHQVHVP 287
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 28.7 bits (61), Expect = 5.7
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -1
Query: 262 LFCLCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 92
L CL V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 91 NFFVAHLELVK 59
V L+ K
Sbjct: 858 QVDVLLLDFQK 868
>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
Length = 147
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +1
Query: 541 ATVSPTPCPSTRDT--HSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAEREIVSWT 714
+T S T S R T ++PTPS T +T Y + + + TT+ I S+T
Sbjct: 76 STTSYTSTTSYRSTPSYTPTPSYTCTTSYTCTTSYTSTTSYTCTTSYTCTTSYTWITSYT 135
Query: 715 SRRS--CVTS 738
S C TS
Sbjct: 136 CTTSYTCTTS 145
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 171 GNTARGASSPAKPALHIPEPLSTT 100
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,007,184
Number of Sequences: 59808
Number of extensions: 728924
Number of successful extensions: 2985
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 2423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2939
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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