Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0420
(796 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 192 2e-49
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 192 3e-49
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 190 7e-49
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 190 9e-49
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 190 9e-49
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 190 9e-49
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 190 9e-49
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 190 9e-49
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 187 6e-48
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 172 3e-43
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 166 2e-41
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 163 9e-41
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 109 2e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 4e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 3e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 6e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 57 1e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 50 2e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 31 0.67
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 31 0.88
At3g57300.1 68416.m06378 transcriptional activator, putative sim... 30 2.0
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie... 30 2.0
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 30 2.0
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 29 2.7
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 29 2.7
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.7
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.7
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 3.6
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 3.6
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 29 3.6
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 29 3.6
At5g18270.2 68418.m02148 no apical meristem (NAM) family protein... 29 4.7
At5g18270.1 68418.m02147 no apical meristem (NAM) family protein... 29 4.7
At3g28790.1 68416.m03593 expressed protein 29 4.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 4.7
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 4.7
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 6.2
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 28 6.2
At1g49880.1 68414.m05592 Erv1/Alr family protein similar to SP|Q... 28 8.2
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (469), Expect = 2e-49
Identities = 112/178 (62%), Positives = 120/178 (67%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TDYLMKI + + T+AEREIV + ALD+EQEM SS
Sbjct: 182 LAGRDLTDYLMKILTERGYSFT-TSAEREIVR-DVKEKLAYIALDYEQEMETANTSSS 237
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 96.7 bits (230), Expect = 2e-20
Identities = 53/77 (68%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + GYSFT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT-ERGYSFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V D+KEKL Y+
Sbjct: 205 SAEREIVRDVKEKLAYI 221
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 192 bits (467), Expect = 3e-49
Identities = 112/178 (62%), Positives = 119/178 (66%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TD+LMKI + + TTAEREIV + ALDFEQE+ SS
Sbjct: 182 LAGRDLTDHLMKILTERGYSFT-TTAEREIVR-DMKEKLSYIALDFEQELETSKTSSS 237
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 94.7 bits (225), Expect = 6e-20
Identities = 53/77 (68%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + GYSFT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILT-ERGYSFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V D+KEKL Y+
Sbjct: 205 TAEREIVRDMKEKLSYI 221
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 190 bits (464), Expect = 7e-49
Identities = 111/178 (62%), Positives = 119/178 (66%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFNTPAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TD+LMKI + + TTAEREIV + ALD+EQE+ SS
Sbjct: 182 LAGRDLTDHLMKILTERGYSFT-TTAEREIVR-DMKEKLSYIALDYEQELETSKTSSS 237
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 94.7 bits (225), Expect = 6e-20
Identities = 53/77 (68%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + GYSFT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILT-ERGYSFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V D+KEKL Y+
Sbjct: 205 TAEREIVRDMKEKLSYI 221
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 190 bits (463), Expect = 9e-49
Identities = 110/178 (61%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TD LMKI + + TTAEREIV + C ALD+EQE+ SS
Sbjct: 182 LAGRDLTDALMKILTERGYSFT-TTAEREIVRDIKEKLCYI-ALDYEQELETAKTSSS 237
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 100 bits (240), Expect = 1e-21
Identities = 55/77 (71%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + GYSFT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILT-ERGYSFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCY+
Sbjct: 205 TAEREIVRDIKEKLCYI 221
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 190 bits (463), Expect = 9e-49
Identities = 109/178 (61%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TDYLMKI TTAEREIV + A+D+EQEM SS
Sbjct: 182 LAGRDLTDYLMKI-LTERGYMFTTTAEREIVRDIKEKLSFV-AVDYEQEMETSKTSSS 237
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 90.6 bits (215), Expect = 1e-18
Identities = 51/77 (66%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDL + + GY FT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILT-ERGYMFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKL +V
Sbjct: 205 TAEREIVRDIKEKLSFV 221
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 190 bits (463), Expect = 9e-49
Identities = 109/178 (61%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TDYLMKI TTAEREIV + A+D+EQEM SS
Sbjct: 182 LAGRDLTDYLMKI-LTERGYMFTTTAEREIVRDIKEKLSFV-AVDYEQEMETSKTSSS 237
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 90.6 bits (215), Expect = 1e-18
Identities = 51/77 (66%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDL + + GY FT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILT-ERGYMFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKL +V
Sbjct: 205 TAEREIVRDIKEKLSFV 221
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 190 bits (463), Expect = 9e-49
Identities = 110/178 (61%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TD LMKI + + TTAEREIV + C ALD+EQE+ SS
Sbjct: 182 LAGRDLTDALMKILTERGYSFT-TTAEREIVRDIKEKLCYI-ALDYEQELETAKTSSS 237
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 100 bits (240), Expect = 1e-21
Identities = 55/77 (71%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + GYSFT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILT-ERGYSFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCY+
Sbjct: 205 TAEREIVRDIKEKLCYI 221
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 190 bits (463), Expect = 9e-49
Identities = 109/178 (61%), Positives = 118/178 (66%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFN+PAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TDYLMKI TTAEREIV + A+D+EQEM SS
Sbjct: 182 LAGRDLTDYLMKI-LTERGYMFTTTAEREIVRDIKEKLSFV-AVDYEQEMETSKTSSS 237
Score = 105 bits (251), Expect = 4e-23
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 90.6 bits (215), Expect = 1e-18
Identities = 51/77 (66%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDL + + GY FT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILT-ERGYMFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKL +V
Sbjct: 205 TAEREIVRDIKEKLSFV 221
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 187 bits (456), Expect = 6e-48
Identities = 110/178 (61%), Positives = 116/178 (65%), Gaps = 1/178 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFETFN PAMYVAIQAVLSLYAS + + VS T P P
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 181
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
TD LMKI TTAEREIV + ALD+EQE+ SS
Sbjct: 182 LAGRDLTDSLMKI-LTERGYMFTTTAEREIVR-DIKEKLAYVALDYEQELETAKSSSS 237
Score = 109 bits (262), Expect = 2e-24
Identities = 49/59 (83%), Positives = 54/59 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 95.1 bits (226), Expect = 5e-20
Identities = 54/77 (70%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + + GY FT
Sbjct: 148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILT-ERGYMFT--T 204
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKL YV
Sbjct: 205 TAEREIVRDIKEKLAYV 221
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 172 bits (418), Expect = 3e-43
Identities = 95/170 (55%), Positives = 113/170 (66%), Gaps = 1/170 (0%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
+RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 612
QIMFE+F P+MY+ IQAVLSLY+S + + VS T P P
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHAILRLD 182
Query: 613 *PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEM 762
T+YL KI T + T+AEREIV + C A+D+EQEM
Sbjct: 183 LAGRDLTEYLTKIMMERGYTYT-TSAEREIVRDIKEKLCYI-AVDYEQEM 230
Score = 102 bits (244), Expect = 3e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQTK 259
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 99.1 bits (236), Expect = 3e-21
Identities = 54/77 (70%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL + GY TY
Sbjct: 149 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTK-IMMERGY--TYTT 205
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCY+
Sbjct: 206 SAEREIVRDIKEKLCYI 222
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 166 bits (403), Expect = 2e-41
Identities = 101/188 (53%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Frame = +1
Query: 202 RDGRYGTEGLLCRR*GTDKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 381
RDG E + G R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 382 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-VVPPVSCWTPATVSPT 558
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+S V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 559 PCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTS 738
P P TDYL++I T + T+AEREIV + C
Sbjct: 154 -VPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYT-TSAEREIVRDIKEKLCYV- 210
Query: 739 ALDFEQEM 762
ALD+EQEM
Sbjct: 211 ALDYEQEM 218
Score = 89.4 bits (212), Expect = 2e-18
Identities = 49/77 (63%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
GRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDL E + GY TY
Sbjct: 137 GRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMT-ERGY--TYTT 193
Query: 690 RAGNRFV-DIKEKLCYV 737
A V DIKEKLCYV
Sbjct: 194 SAEREIVRDIKEKLCYV 210
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE 247
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEE 48
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 163 bits (397), Expect = 9e-41
Identities = 91/177 (51%), Positives = 110/177 (62%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
+ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 436 QIMFETFNTPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT* 615
QIMFETF P+MY+ +QA LSL+AS + P + P
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDL 137
Query: 616 PVATSTDYLMKIPHRAXATRSLTTAEREIVSWTSRRSCVTSALDFEQEMANGLHPSS 786
T+YLMKI R T+AERE+V + ALD+EQEM S+
Sbjct: 138 AGRHLTNYLMKI----MMERGYTSAEREVVR-DIKEQFGYIALDYEQEMEKATKSSA 189
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/40 (87%), Positives = 36/40 (90%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 629
GRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR L
Sbjct: 103 GRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHL 142
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 109 bits (262), Expect = 2e-24
Identities = 45/86 (52%), Positives = 62/86 (72%)
Frame = +1
Query: 250 TDKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 429
++ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 430 MTQIMFETFNTPAMYVAIQAVLSLYA 507
M + MFE +N +++ IQAVL+LYA
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYA 145
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLNRLPHEDSSPSXGYSFTYHR 689
G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR + D GY+ ++
Sbjct: 147 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAY-LVDLLSRRGYAM--NK 203
Query: 690 RAGNRFV-DIKEKLCYV 737
A V +IKEKLCY+
Sbjct: 204 TADFETVREIKEKLCYI 220
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 244
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 95.5 bits (227), Expect = 4e-20
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +1
Query: 274 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 453
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 454 FNTPAMYVAIQAVLSLYA 507
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 519 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 629
TG+V+D GDG +H VP+ EGY + I + +AG+D+
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDV 209
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 95 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 181
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/85 (41%), Positives = 56/85 (65%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 435
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 436 QIMFETFNTPAMYVAIQAVLSLYAS 510
++MFE + PA+++A VL+ +A+
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFAT 169
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 184
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 510 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 629
GR T +V+D G G + P+++GY L A++ L G L
Sbjct: 170 GRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFL 209
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.1 bits (159), Expect = 6e-12
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +1
Query: 283 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 459
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 460 TPAMYVAIQAVLSLYA 507
Y + QAVLSLYA
Sbjct: 117 VSGFYASEQAVLSLYA 132
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 256 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 429
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 83 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 184
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 274 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 453
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 454 FNTPAMYVA-IQAVLSLYASVVPPVS 528
F ++Y+A Q+++ LY + P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/99 (29%), Positives = 41/99 (41%)
Frame = +3
Query: 441 HVRNIQHARHVRRHPSRALAVRVGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 620
H +++ H R P L+ +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSILSKT---QCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 621 RDLNRLPHEDSSPSXGYSFTYHRRAGNRFVDIKEKLCYV 737
+ E S Y D KEKLC+V
Sbjct: 187 KAFTNYLKELVS----YRSINVMDETFLVDDAKEKLCFV 221
Score = 32.7 bits (71), Expect = 0.29
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 190
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 283 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 459
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 460 TPAMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHS 588
PA+ + A S + + + C V CP THS
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGI-CKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 98 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 244
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 219 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 82
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 508 SVVPPVSCWTPATVSPTPCPSTRDT-HSPTPSC 603
S+ PP+SC TP PCP + HS T C
Sbjct: 644 SIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 494 SRCTRRSYHRYRAGLRRRCL-PHRAHLRGIRTPPRHPASG 610
S T +SY ++AG R R L P + L +R PPR PA+G
Sbjct: 594 STATSKSY-TFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At3g57300.1 68416.m06378 transcriptional activator, putative
similar to transcriptional activator SRCAP [Homo
sapiens] GI:5106572; contains Pfam profiles PF00271:
Helicase conserved C-terminal domain, PF00176: SNF2
family N-terminal domain
Length = 1507
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +3
Query: 648 DSSPSXGYSFTYHRRAGNRFVDIKEKLCYVGS*LRAGDG 764
D+SP+ T HRR DI K+ Y S L GDG
Sbjct: 151 DNSPNFAADVTPHRRGSYHDRDITPKIAYEPSYLDIGDG 189
>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
PIR:S53363
Length = 438
Score = 29.9 bits (64), Expect = 2.0
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 544 TVSPTPCPSTRDTHSP--TPSCVWT*PVATSTDYLMKIPHRAXATRSLT-TAEREIVSWT 714
TVS + PS+R T SP TPS + T TST K A +RSLT A+ +I +
Sbjct: 154 TVSRSLTPSSRKTPSPTSTPSRIST---TTSTTPSFKTAGDAQRSRSLTPRAKPQIAANA 210
Query: 715 SRRSCVTSA 741
S R+ V S+
Sbjct: 211 SSRTNVRSS 219
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 508 SVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PVAT 627
+ +PPV+ TP+ ++ P P T +PT S T PVA+
Sbjct: 36 TALPPVTAETPSPIASPPVPVNEPTPAPTTSPT-TSPVAS 74
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 476 SPSKPCSRCTRRSYHRYRAGLRRRCL---PHRAHLRGI-RTPPRHPASGLSRS 622
SPS+ R +RRS R L RR L P R R + R+P R P +SRS
Sbjct: 522 SPSRSPVRSSRRSLSRSPIQLSRRSLSRSPTRLSRRSLSRSPIRSPRKSVSRS 574
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 466 AMYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 600
+M AI++ S +A++ PV +P SP+P PS + SP+PS
Sbjct: 509 SMVGAIESRSSTHATIEDPVCEQSP---SPSPSPSPSPSPSPSPS 550
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 517 PPVSCWTPATVSPTPCPSTRDTHSPTP 597
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 517 PPVSCWTPATVSPTPCPSTRDTHSPTP 597
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 489
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 490 VLSLYAS 510
VL+LYA+
Sbjct: 241 VLALYAA 247
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Frame = +1
Query: 340 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 489
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 490 VLSLYAS 510
VL+LYA+
Sbjct: 241 VLALYAA 247
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 PPVSCWTPATVSP--TPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTT 687
P +S TPA+VS P P+ +PTP+ PVA + IP AT S +T
Sbjct: 104 PSISPQTPASVSAPVAPAPTRPPPPAPTPTPA---PVAATETVTTPIPEPVPATISSST 159
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 PPVSCWTPATVSP--TPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTT 687
P +S TPA+VS P P+ +PTP+ PVA + IP AT S +T
Sbjct: 104 PSISPQTPASVSAPVAPAPTRPPPPAPTPTPA---PVAATETVTTPIPEPVPATISSST 159
>At5g18270.2 68418.m02148 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 295 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 468
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 469 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPT 594
I +L S +PP+ P+ +S T P+ + + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At5g18270.1 68418.m02147 no apical meristem (NAM) family protein
contains Pfam PF02365 : No apical meristem (NAM)
protein; similar to cup-shaped cotyledon CUC2
(GI:1944132) [Arabidopsis thaliana]
Length = 335
Score = 28.7 bits (61), Expect = 4.7
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 295 GIVTNW--DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPA 468
G TNW + +++YN + A +E V NP + MT+I E F
Sbjct: 135 GEKTNWVMHEYRLEGKYSYYNLPKSARDEWVVCRVFHKNNPSTTTQPMTRIPVEDFTRMD 194
Query: 469 MYVAIQAVLSLYASVVPPVSCWTPATVSPTPCPSTRDTHSPT 594
I +L S +PP+ P+ +S T P+ + + PT
Sbjct: 195 SLENIDHLLDF--SSLPPLI--DPSFMSQTEQPNFKPINPPT 232
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 535 TPATVSP-TPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAEREIVSW 711
TP+T +P TP PST +PTPS A ST K + + S+ ++E S
Sbjct: 282 TPSTPTPSTPTPSTPTPSTPTPSTPTPSTPAPSTPAAGKTSEKGSESASM---KKESNSK 338
Query: 712 TSRRSCVTSALDFEQEMANG 771
+ S + ++ +E G
Sbjct: 339 SESESAASGSVSKTKETNKG 358
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 268 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 429
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 268 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 429
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 396 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 497
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 517 PPVSCWTPATVSPTPCPSTRDTHSPTP 597
PP S TP SP P P + SPTP
Sbjct: 233 PPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At1g49880.1 68414.m05592 Erv1/Alr family protein similar to
SP|Q63042 Augmenter of liver regeneration {Rattus
norvegicus}; contains Pfam profile PF04777: Erv1 / Alr
family
Length = 191
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 547 VSPTPCPSTRDTHSPTPSCVWT*PVATSTDYLMKIPHRAXATRSLTTAEREIVSWT 714
+ TP S +P S + P+AT++ L K+P + +T +T + +WT
Sbjct: 30 IKNTPPSSQSTIQNPIISLDSSPPIATNSSSLQKLPLKDKSTGPVTKEDLGRATWT 85
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,741,822
Number of Sequences: 28952
Number of extensions: 478166
Number of successful extensions: 1703
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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