Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0419
         (384 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    50   1e-05
UniRef50_Q8IPH8 Cluster: CG6976-PB, isoform B; n=7; Drosophila m...    31   9.9  
UniRef50_O61228 Cluster: Thr4 protein; n=2; Tenebrionidae|Rep: T...    31   9.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 50.4 bits (115), Expect = 1e-05
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -2

Query: 353 LLLRWVDELTAHLVLSGYWSP 291
           LLLRWVDELTAHLVLSGYWSP
Sbjct: 155 LLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q8IPH8 Cluster: CG6976-PB, isoform B; n=7; Drosophila
           melanogaster|Rep: CG6976-PB, isoform B - Drosophila
           melanogaster (Fruit fly)
          Length = 2122

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = +1

Query: 217 SRCNYTGDLRTCIQGGWRIYVVDVYGLQ*PLNT 315
           +R +++GDLRT +Q     Y+VD++  + P++T
Sbjct: 569 NRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMDT 601


>UniRef50_O61228 Cluster: Thr4 protein; n=2; Tenebrionidae|Rep: Thr4
           protein - Tenebrio molitor (Yellow mealworm)
          Length = 810

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 333 RAHSPPGVKWLLEPIDIHNVNAPPTLNTSSKVSSIVTTAAP-PFKPKRITASR 178
           R HS PG      P+ IHN       ++ +K+S++VT   P    P  ++ SR
Sbjct: 127 RPHSSPGRPANTSPVIIHNPTIAQPTSSRAKLSTMVTCQEPTSSSPSAVSKSR 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,986,490
Number of Sequences: 1657284
Number of extensions: 5446755
Number of successful extensions: 13185
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13180
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)