Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0419
         (384 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   4.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   5.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   5.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   5.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   5.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   5.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   5.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   5.6  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 315 GVKWLLEPIDIHNVNAPPT 259
           G  W L+    H+V AP T
Sbjct: 250 GHSWYLQSTSNHDVGAPAT 268


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 253 YKF*GLQYSYNGC 215
           Y F G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 252 TSSKVSSIVTTAAPPFKPKRITASR 178
           +S   S +  + +PP KP   TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 252 TSSKVSSIVTTAAPPFKPKRITASR 178
           +S   S +  + +PP KP   TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 9   LY*SCHFLEYALCVVFILFL 68
           LY S   L+Y  CVV ++ L
Sbjct: 287 LYSSLLLLDYVSCVVALIIL 306


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 9   LY*SCHFLEYALCVVFILFL 68
           LY S   L+Y  CVV ++ L
Sbjct: 213 LYSSLLLLDYVSCVVALIIL 232


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 252 TSSKVSSIVTTAAPPFKPKRITASR 178
           +S   S +  + +PP KP   TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 252 TSSKVSSIVTTAAPPFKPKRITASR 178
           +S   S +  + +PP KP   TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 252 TSSKVSSIVTTAAPPFKPKRITASR 178
           +S   S +  + +PP KP   TAS+
Sbjct: 96  SSGLTSPLSVSTSPPGKPATSTASQ 120


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 252 TSSKVSSIVTTAAPPFKPKRITASR 178
           +S   S +  + +PP KP   TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 252 TSSKVSSIVTTAAPPFKPKRITASR 178
           +S   S +  + +PP KP   TAS+
Sbjct: 140 SSGLTSPLSVSTSPPGKPATSTASQ 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,928
Number of Sequences: 336
Number of extensions: 1577
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)