Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0419
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   4.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   8.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   8.6  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   8.6  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 194 RFGLKGGAAVVTILETLELVFKVGGAFTLWMS 289
           +FG +G   V   +   E++ K+ G   +W S
Sbjct: 256 QFGAQGKLIVDFFMILNEIIMKLVGIIIMWYS 287


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 214 PTLQTETHYCFTAXIVXXYLFXII 143
           P++QT T+Y      V   LF I+
Sbjct: 62  PSMQTPTNYYLFNLAVSDLLFLIL 85


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 67  KNKIKTTHKAYS 32
           KNK++TTH   S
Sbjct: 451 KNKVETTHSGTS 462


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding
          protein ASP6 protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 82 TVEXPKNKIKTTHKAYSKK 26
          T+E  K  IK   K  SKK
Sbjct: 28 TIEEAKKTIKNLRKVCSKK 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,916
Number of Sequences: 438
Number of extensions: 1650
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)