Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0418
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   7.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.2  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 596 QRLAYHYLHHYRLNLRKLIGKIWLYNF 676
           +RL + Y+     N++KLI   W+  F
Sbjct: 288 KRLRFAYVTRTGANIKKLIVNTWISLF 314


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 250 CLIPWKSLSSGLRPSKSACSS 188
           C+  W+S  S LRP  S  S+
Sbjct: 227 CIEIWQSSESSLRPRSSQKSA 247


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 662 IFFL*AFSSSVCSDANNGTLIAAGM 588
           +F+L   +S +C++AN   ++  G+
Sbjct: 206 LFYLSKRASDLCNEANKTKILLVGL 230


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 107 VCVNFLVLFIRHFSKINKR 51
           V   FL LF+ H+  IN++
Sbjct: 228 VISTFLQLFLEHYEVINRQ 246


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 107 VCVNFLVLFIRHFSKINKR 51
           V   FL LF+ H+  IN++
Sbjct: 154 VISTFLQLFLEHYEVINRQ 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,442
Number of Sequences: 336
Number of extensions: 3439
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)