Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0418
         (840 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      29   0.18 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          27   0.94 
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       25   3.8  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   5.0  

>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 675 LNTLFGSVKLTLLESLXSAFANPEEKSLGSER 770
           L TLFG++ L LL S    FANP   +  +ER
Sbjct: 7   LVTLFGAIALLLLVSTEMTFANPLSPNSPAER 38


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -3

Query: 241 PWKSLSSGLRPSKSACSSFSPT*LPSESKSESFSLPES 128
           P ++ +S L PS S+ S  SP+ + S +   S   PES
Sbjct: 57  PGRTYASALSPSSSSASPSSPSSVASPNSRASNMSPES 94


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 66  AKMPNKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPE 224
           +K  N +  E + + +   + DS  + DSDFD D   VG++ L+++ E    E
Sbjct: 80  SKKTNPQIVEYEFDDDLPFDDDSDFDDDSDFDDD---VGDR-LESEEEDSTDE 128


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -3

Query: 295 PSKVNI*FQKQLPHSCLIPWKSLSSGL---RPSKSACSSFSPT*LPSESKSESFSLPES 128
           PS  N  ++    HS +    + S+G        S+ SS S +   S S S SFS P+S
Sbjct: 76  PSPANSHYEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDS 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,266
Number of Sequences: 2352
Number of extensions: 12173
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)