Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0418
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 31 1.0
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 31 1.0
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 30 1.8
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 29 3.1
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 4.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 4.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 4.1
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 29 5.4
U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical p... 29 5.4
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 29 5.4
U00032-11|AAA50630.1| 189|Caenorhabditis elegans Hypothetical p... 29 5.4
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical p... 28 7.2
Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 28 7.2
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 28 7.2
AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A ... 28 7.2
AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical ... 28 7.2
Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z46937-4|CAA87059.2| 221|Caenorhabditis elegans Hypothetical
protein F43C1.5 protein.
Length = 221
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 69 KMPNKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQAD 203
K+P K +K + + K+ + D D DG Y+GE E++++
Sbjct: 152 KIPGKNSKNSKISVNKAKKLEPRRRSDEDRVPDGPYIGEGEVKSE 196
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 69 KMPNKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFE 209
K+P +D E KE+D ++D D D D V +KE +A E
Sbjct: 1072 KIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQRE 1118
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 69 KMPNKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFE 209
K+P +D E KE+D ++D D D D V +KE +A E
Sbjct: 1072 KIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQRE 1118
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 69 KMPNKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQAD 203
K + +KE + + E+ KE+D G EK+ D D + +K+ + D
Sbjct: 1228 KDKKEPHKEKEKDKEKEKEEDKGKEKEKHKDKDKDKEHKKKSRED 1272
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 84 KNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 233
K E D + + K++ G D +SDG E E + + EG + EDSD
Sbjct: 702 KLDESDEDEDELKDRKHGLFDDEASESDGEDEFEDEDEEEPEGEDLEDSD 751
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 69 KMPNKKNKEIDTNS-ERTKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDS 230
K+ +K K+ +T S E+ KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9920 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEA 9975
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 69 KMPNKKNKEIDTNS-ERTKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDS 230
K+ +K K+ +T S E+ KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9940 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEA 9995
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 69 KMPNKKNKEIDTNS-ERTKEQDSGSEKDSDFDSDGNYVGEKE-LQADFEGRNPEDS 230
K+ +K K+ +T S E+ KEQ+ +++ S + D EK+ L+++ + + E++
Sbjct: 9940 KLEEQKKKDAETASIEKQKEQEKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEA 9995
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +3
Query: 84 KNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQ 251
+ K + N E+ +E++ EK+ + D + EKE + D E + IK+
Sbjct: 355 EEKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEKEKDKEKEREKRKSKEKIKE 410
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 81 KKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPED 227
KKNKE + E+ KE++ EKD + + + EK+ + + E R ++
Sbjct: 360 KKNKEKEREKEKDKEKE--KEKDKEKEKEKEKEKEKDKEKEREKRKSKE 406
>U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical
protein ZK1127.4 protein.
Length = 349
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 523 IKYILADDSQHTGLVINERILNIPAAISVPLFASLQTELEKAHRKNMAI 669
I+ I + L +NER+LN P + +F S++ +L K I
Sbjct: 175 IEEIQVSGDGKSALFVNERLLNFPTIVVPQIFGSIREDLSGFETKYKTI 223
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 69 KMPNKKNKEIDTNSERTKEQDSGSEKDSDFDSD-GNYVGEKELQADFEGRNPEDSD 233
K KK+K+ + + E K++D +KD D D D N +K+ + D + E+ +
Sbjct: 258 KDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKE 313
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 69 KMPNKKNKEIDTNSERTKEQDS---GSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 233
K KK K+ + + KE+D +KD D D D +K+ + D + ED D
Sbjct: 295 KKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKD 352
>U00032-11|AAA50630.1| 189|Caenorhabditis elegans Hypothetical
protein F37A4.2 protein.
Length = 189
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 81 KKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 233
KKN E D +S + DSGS D++ + N E + + + E + E ++
Sbjct: 136 KKNNESDESSSDDSDSDSGSGSDNESEGKQNTEVEDKDKVEKEETDDEKTE 186
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 72 MPNKKNKEIDTNSERTKEQDSGSEKDSDFD 161
+ N K +E+ +R ++QDS SE+D + +
Sbjct: 347 LDNSKRREVQKQRKRPQKQDSSSEEDDEVE 376
>Z81118-10|CAB61029.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 57 VYFAKMPNKKNKEIDTNSERTKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 224
V ++ P +K+KE+ +E +E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNE-PEEEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z77668-2|CAB61021.1| 657|Caenorhabditis elegans Hypothetical
protein R11G10.1a protein.
Length = 657
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 57 VYFAKMPNKKNKEIDTNSERTKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 224
V ++ P +K+KE+ +E +E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNE-PEEEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 78 NKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 233
+KK K S+R K+ + S++D D D D KE+Q + E+ D
Sbjct: 25 SKKMKMAKEKSKRKKKMVASSDEDED-DDDDEEENRKEMQGFIADDDDEEED 75
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 78 NKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 233
+KK K S+R K+ + S++D D D D KE+Q + E+ D
Sbjct: 25 SKKMKMAKEKSKRKKKMVASSDEDED-DDDDEEENRKEMQGFIADDDDEEED 75
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 78 NKKNKEIDTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSD 233
+KK K S+R K+ + S++D D D D KE+Q + E+ D
Sbjct: 25 SKKMKMAKEKSKRKKKMVASSDEDED-DDDDEEENRKEMQGFIADDDDEEED 75
>AJ000538-1|CAA04171.1| 657|Caenorhabditis elegans GluClalpha2A
protein protein.
Length = 657
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +3
Query: 57 VYFAKMPNKKNKEIDTNSERTKEQDSGSEKDSDFDS-DGNYVGEKELQADFEGRNPE 224
V ++ P +K+KE+ +E +E++ G E D ++ +G Y E A+ E +PE
Sbjct: 111 VITSETPVEKHKEVHFKNE-PEEEEIGKEDDGGGEAEEGEYEEENGSDAEEEEESPE 166
>AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical
protein H06H21.3 protein.
Length = 216
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 78 NKKNKEIDTNSERTKEQDSGSEKDSDFDS-DGNYVGEKELQA 200
++K+ E + S++ +E D SE++SD DS D + + E++L A
Sbjct: 152 SEKSDE-EAGSDKEEESDDDSEEESDEDSDDSDNIREEDLAA 192
>Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical
protein F02H6.1 protein.
Length = 537
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 75 PNKKNKEIDTNSERTKEQDSGSE 143
PN N+E++ S+RT+++ +GSE
Sbjct: 507 PNAGNEEVEDPSQRTRKRGNGSE 529
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 66 AKMPNKKNKEIDTNSERTKEQDSGSEKDSD 155
AK+ +K + D++ E SGSE DSD
Sbjct: 546 AKLGKRKRRHRDSDDESDPSSGSGSESDSD 575
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,384,404
Number of Sequences: 27780
Number of extensions: 308521
Number of successful extensions: 1246
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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