Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0418
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.87 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   0.87 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.87 
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    25   0.87 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.1  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   8.1  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 99  DTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFE 209
           +TNSE T ++D  S+         +Y+  ++L  DFE
Sbjct: 304 ETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFE 340


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 99  DTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFE 209
           +TNSE T ++D  S+         +Y+  ++L  DFE
Sbjct: 219 ETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFE 255


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 99  DTNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFE 209
           +TNSE T ++D  S+         +Y+  ++L  DFE
Sbjct: 538 ETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFE 574


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 25.0 bits (52), Expect = 0.87
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 93  EIDTNSERTKEQ-DSGSEKDSDFDSDGNYVGEKE 191
           E D  + RT     SGS  DSD  +D  +VG+ +
Sbjct: 6   ECDLATPRTGTNCSSGSSSDSDGQTDEGFVGDSQ 39


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 608 YHYLHHYRLNLRKLIGKIW 664
           YH L HYR  L++ I  I+
Sbjct: 137 YHPLRHYRSGLKRAIRSIF 155


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 138 SEKDSDFDSDGNYVGEKELQAD 203
           + +DSD  SDGN   E   +AD
Sbjct: 192 NRRDSDDGSDGNDGDESSCRAD 213


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/50 (16%), Positives = 25/50 (50%)
 Frame = +3

Query: 102 TNSERTKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQ 251
           T+S  ++ +DS  E  + + +DG     ++   +++ ++      H +++
Sbjct: 227 TSSCHSRYEDSRHEDGNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEE 276


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,226
Number of Sequences: 438
Number of extensions: 3536
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)