Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0417
         (854 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ305403-1|ABD58935.1|  538|Drosophila melanogaster hyrax protein.     30   3.5  
AY061525-1|AAL29073.1|  538|Drosophila melanogaster LD47989p pro...    30   3.5  
AE014297-866|AAF54331.1|  538|Drosophila melanogaster CG11990-PA...    30   3.5  

>DQ305403-1|ABD58935.1|  538|Drosophila melanogaster hyrax protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 715 LCFFHLCFIKRKLAGRVQEKQNFIFFLNQNFKFVECAI 602
           +C FHLCF + KL   V+     +  L+QN + ++ A+
Sbjct: 480 ICAFHLCFSEMKLDSNVERWSVTLLRLSQNKRHMDRAV 517


>AY061525-1|AAL29073.1|  538|Drosophila melanogaster LD47989p
           protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 715 LCFFHLCFIKRKLAGRVQEKQNFIFFLNQNFKFVECAI 602
           +C FHLCF + KL   V+     +  L+QN + ++ A+
Sbjct: 480 ICAFHLCFSEMKLDSNVERWSVTLLRLSQNKRHMDRAV 517


>AE014297-866|AAF54331.1|  538|Drosophila melanogaster CG11990-PA
           protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 715 LCFFHLCFIKRKLAGRVQEKQNFIFFLNQNFKFVECAI 602
           +C FHLCF + KL   V+     +  L+QN + ++ A+
Sbjct: 480 ICAFHLCFSEMKLDSNVERWSVTLLRLSQNKRHMDRAV 517


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,500,847
Number of Sequences: 53049
Number of extensions: 640715
Number of successful extensions: 1373
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)