Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0414
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0263 - 16311650-16311675,16312101-16312149,16312987-163131...    31   0.86 
07_01_0231 - 1698244-1700154                                           31   1.5  
07_01_0227 - 1663375-1665405                                           29   3.5  
07_01_0219 - 1627669-1629765                                           28   8.1  

>10_08_0263 -
           16311650-16311675,16312101-16312149,16312987-16313167,
           16313900-16314722,16314749-16314818
          Length = 382

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = -2

Query: 527 EALKKSNIYIEIITIEMPLRLLKVKLCIISFNFPVH-QNP---KLFFVCPYHHPAYFCRE 360
           E  K+  +  ++I  ++ +RL   + C   F FP+H Q P   +LFF         F   
Sbjct: 2   EMTKQQQLLKKLIPQKITMRLKATEACWRIFTFPLHYQEPSVQRLFFHVENEQQVIFPDS 61

Query: 359 AVMRFSLKGGAAVVTMYTETLE 294
             ++  ++   + VTM+TE +E
Sbjct: 62  TDLQEIIRHPRSGVTMFTEWME 83


>07_01_0231 - 1698244-1700154
          Length = 636

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/50 (24%), Positives = 29/50 (58%)
 Frame = +3

Query: 309 IHSYNGCPTLQTETHYCFTAEISRVVVRTHEKQFRVLVNRKIKTNNA*FD 458
           +++++G PTL     +    +I+  ++  HE+  +V+++R +K +N   D
Sbjct: 437 LYNFHGQPTLNWSQRFKIIKDIASGLLYLHEEWDKVVIHRDVKASNVLID 486


>07_01_0227 - 1663375-1665405
          Length = 676

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 309 IHSYNGCPTLQTETHYCFTAEISRVVVRTHEKQFRVLVNRKIKTNNA*FD 458
           +H   G PTL     +    +I+  ++  HE+  +V+++R +K +N   D
Sbjct: 435 LHRQEGKPTLNWGQRFQIIKDIASGLLYLHEEWDKVVIHRDVKASNVLLD 484


>07_01_0219 - 1627669-1629765
          Length = 698

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +3

Query: 309 IHSYNGCPTLQTETHYCFTAEISRVVVRTHEKQFRVLVNRKIKTNNA*FD 458
           +H  +  PTL     +    +I+  ++  HE+  +V+++R IK +N   D
Sbjct: 459 LHGQDNKPTLSWAQRFQIIKDIASGLLYLHEECDKVVIHRDIKASNVLLD 508


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,282,118
Number of Sequences: 37544
Number of extensions: 382782
Number of successful extensions: 676
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)