Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0413
         (861 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   0.73 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   3.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   3.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.2  
AF457562-1|AAL68792.1|   78|Anopheles gambiae hypothetical prote...    24   5.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   5.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.0  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 27.1 bits (57), Expect = 0.73
 Identities = 17/68 (25%), Positives = 24/68 (35%)
 Frame = +3

Query: 351  CGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVEELPESA 530
            C    Q  FT YH   ++   K   Y   VI+      +  N+ Y D  +        S+
Sbjct: 1871 CSGPAQAYFTEYHQKAQQHCVKPQYYFGNVISEQEAGRQRYNYYYKDFDLSDSSSSESSS 1930

Query: 531  EKKELRDS 554
               E  DS
Sbjct: 1931 SSDESDDS 1938


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 802 QPVFVVGPSLQGY 840
           +PV +VGPSL+GY
Sbjct: 241 RPVVLVGPSLKGY 253


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +1

Query: 148  NYSSDRKPNLAAYKRGTGGRSSFNGIVATVFG-CTGLSDAMCATNWEKLVPS*FYHTEAI 324
            +Y S R+   A Y + +     FN +    F    G+S       W KLV + + HT+  
Sbjct: 2225 DYGSHRQLIRAKYFQSSA-EELFNPLRKDTFEQIQGISQESSTDIWHKLVDAGYLHTDCY 2283

Query: 325  SMMPKG*KC 351
            S   K  KC
Sbjct: 2284 STSAK--KC 2290


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = +1

Query: 148  NYSSDRKPNLAAYKRGTGGRSSFNGIVATVFG-CTGLSDAMCATNWEKLVPS*FYHTEAI 324
            +Y S R+   A Y + +     FN +    F    G+S       W KLV + + HT+  
Sbjct: 2226 DYGSHRQLIRAKYFQSSA-EELFNPLRKDTFEQIQGISQESSTDIWHKLVDAGYLHTDCY 2284

Query: 325  SMMPKG*KC 351
            S   K  KC
Sbjct: 2285 STSAK--KC 2291


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 536 EGVERFIHLSYLNAEEHPKPLVLKKPSAW 622
           EG   F+    L A+ HP+ +V    +AW
Sbjct: 156 EGFAEFVEAIELEAQSHPQVVVAGDFNAW 184


>AF457562-1|AAL68792.1|   78|Anopheles gambiae hypothetical protein
           15 protein.
          Length = 78

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 145 ANYSSDRKPNLAAYKRGTGGRSSFNG 222
           AN S D+K +   +  GTG R +  G
Sbjct: 42  ANKSKDKKASAPKHSLGTGARMALTG 67


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 719 FLRSLVNKMRFSQQP 763
           FLR  +NKMRF+  P
Sbjct: 940 FLREYLNKMRFTSSP 954


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 284  KNWYPVNFTIQR 319
            +NWYP   T+QR
Sbjct: 1209 RNWYPDKLTVQR 1220


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 898,936
Number of Sequences: 2352
Number of extensions: 17737
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)