Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0413
(861 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 103 6e-22
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 103 6e-22
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 103 6e-22
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 103 6e-22
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 103 6e-22
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 103 6e-22
L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related prote... 32 3.1
BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein pr... 32 3.1
AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related pro... 32 3.1
U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon ca... 31 4.1
S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon ca... 31 4.1
L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon, c... 31 4.1
BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein. 31 4.1
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 31 4.1
BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for IM... 31 4.1
AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directe... 31 4.1
AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon ... 31 4.1
AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon ... 31 4.1
AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon ... 31 4.1
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 103 bits (248), Expect = 6e-22
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +3
Query: 255 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 434
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 63 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 122
Query: 435 VVINLVGRDYETKNFKYNDVHV 500
VVINL+GRD+ETKNF + DV V
Sbjct: 123 VVINLIGRDWETKNFDFEDVFV 144
Score = 65.7 bits (153), Expect = 2e-10
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = +2
Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI+G E
Sbjct: 156 EAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGRE 208
Query: 713 DRFLRSLVNKMRFSQQPMPL 772
DRFL S + RF P+PL
Sbjct: 209 DRFLNSFASMHRFG--PIPL 226
Score = 37.1 bits (82), Expect = 0.082
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 163 RKPNLAAYKRGTGGRSSFNGIVATVFGCTG 252
R+ + A G GGRSS +GIVATVFG TG
Sbjct: 32 RQLHHALMPHGKGGRSSVSGIVATVFGATG 61
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 103 bits (248), Expect = 6e-22
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +3
Query: 255 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 434
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 65 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 124
Query: 435 VVINLVGRDYETKNFKYNDVHV 500
VVINL+GRD+ETKNF + DV V
Sbjct: 125 VVINLIGRDWETKNFDFEDVFV 146
Score = 65.7 bits (153), Expect = 2e-10
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = +2
Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI+G E
Sbjct: 158 EAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGRE 210
Query: 713 DRFLRSLVNKMRFSQQPMPL 772
DRFL S + RF P+PL
Sbjct: 211 DRFLNSFASMHRFG--PIPL 228
Score = 37.1 bits (82), Expect = 0.082
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 163 RKPNLAAYKRGTGGRSSFNGIVATVFGCTG 252
R+ + A G GGRSS +GIVATVFG TG
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATG 63
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 103 bits (248), Expect = 6e-22
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +3
Query: 255 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 434
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 65 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 124
Query: 435 VVINLVGRDYETKNFKYNDVHV 500
VVINL+GRD+ETKNF + DV V
Sbjct: 125 VVINLIGRDWETKNFDFEDVFV 146
Score = 65.7 bits (153), Expect = 2e-10
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = +2
Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI+G E
Sbjct: 158 EAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGRE 210
Query: 713 DRFLRSLVNKMRFSQQPMPL 772
DRFL S + RF P+PL
Sbjct: 211 DRFLNSFASMHRFG--PIPL 228
Score = 37.1 bits (82), Expect = 0.082
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 163 RKPNLAAYKRGTGGRSSFNGIVATVFGCTG 252
R+ + A G GGRSS +GIVATVFG TG
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATG 63
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 103 bits (248), Expect = 6e-22
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +3
Query: 255 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 434
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 65 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 124
Query: 435 VVINLVGRDYETKNFKYNDVHV 500
VVINL+GRD+ETKNF + DV V
Sbjct: 125 VVINLIGRDWETKNFDFEDVFV 146
Score = 65.7 bits (153), Expect = 2e-10
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = +2
Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI+G E
Sbjct: 158 EAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGRE 210
Query: 713 DRFLRSLVNKMRFSQQPMPL 772
DRFL S + RF P+PL
Sbjct: 211 DRFLNSFASMHRFG--PIPL 228
Score = 37.1 bits (82), Expect = 0.082
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 163 RKPNLAAYKRGTGGRSSFNGIVATVFGCTG 252
R+ + A G GGRSS +GIVATVFG TG
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATG 63
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 103 bits (248), Expect = 6e-22
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +3
Query: 255 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 434
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 26 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 85
Query: 435 VVINLVGRDYETKNFKYNDVHV 500
VVINL+GRD+ETKNF + DV V
Sbjct: 86 VVINLIGRDWETKNFDFEDVFV 107
Score = 65.7 bits (153), Expect = 2e-10
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = +2
Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI+G E
Sbjct: 119 EAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGRE 171
Query: 713 DRFLRSLVNKMRFSQQPMPL 772
DRFL S + RF P+PL
Sbjct: 172 DRFLNSFASMHRFG--PIPL 189
Score = 36.3 bits (80), Expect = 0.14
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 193 GTGGRSSFNGIVATVFGCTG 252
G GGRSS +GIVATVFG TG
Sbjct: 5 GKGGRSSVSGIVATVFGATG 24
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 103 bits (248), Expect = 6e-22
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +3
Query: 255 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 434
+GRYV N LG++G+Q+I+PYR D YD L+ GDLGQ+LF + D++SI + V++SN
Sbjct: 65 LGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSN 124
Query: 435 VVINLVGRDYETKNFKYNDVHV 500
VVINL+GRD+ETKNF + DV V
Sbjct: 125 VVINLIGRDWETKNFDFEDVFV 146
Score = 65.7 bits (153), Expect = 2e-10
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = +2
Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
E GVE+FIH+S+LNA +K S + +K +GE VR+ +P A I++ SDI+G E
Sbjct: 158 EAGVEKFIHVSHLNAN-------IKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGRE 210
Query: 713 DRFLRSLVNKMRFSQQPMPL 772
DRFL S + RF P+PL
Sbjct: 211 DRFLNSFASMHRFG--PIPL 228
Score = 37.1 bits (82), Expect = 0.082
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 163 RKPNLAAYKRGTGGRSSFNGIVATVFGCTG 252
R+ + A G GGRSS +GIVATVFG TG
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATG 63
>L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +2
Query: 575 AEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRFS 754
A EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N +
Sbjct: 1167 ATEHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQINLIDKK 1225
Query: 755 QQPM 766
+P+
Sbjct: 1226 WKPL 1229
>BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein
protein.
Length = 1162
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +2
Query: 575 AEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRFS 754
A EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N +
Sbjct: 867 ATEHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQINLIDKK 925
Query: 755 QQPM 766
+P+
Sbjct: 926 WKPL 929
>AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related protein
protein.
Length = 1462
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/64 (28%), Positives = 36/64 (56%)
Frame = +2
Query: 575 AEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDRFLRSLVNKMRFS 754
A EHP+ V+K+ S+ SK LGE +++ +A++ A + G ++ +S +N +
Sbjct: 1167 ATEHPQAEVVKQESSMSESKVLGEVG-KQDSSSASLASAGESTGKKEVAEKSQINLIDKK 1225
Query: 755 QQPM 766
+P+
Sbjct: 1226 WKPL 1229
>U49356-1|AAA90924.1| 2285|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2285
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 1567 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 1622
>S60080-1|AAA15448.1| 2257|Homo sapiens DNA polymerase epsilon
catalytic subunit protein.
Length = 2257
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 1539 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 1594
>L09561-1|AAC19148.1| 2286|Homo sapiens DNA polymerase epsilon,
catalytic polypeptide protein.
Length = 2286
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 1568 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 1623
>BC087613-1|AAH87613.1| 797|Homo sapiens POLE protein protein.
Length = 797
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 79 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 134
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 565 LFKC*RTSETSCPEETVCLENKQVFGRVCSQRGIPN 672
L K RTS S E+T C NK + GRV + G PN
Sbjct: 275 LSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPN 310
>BC007599-1|AAH07599.1| 797|Homo sapiens Unknown (protein for
IMAGE:3347229) protein.
Length = 797
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 79 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 134
>AY273166-1|AAP12650.1| 2265|Homo sapiens polymerase (DNA directed),
epsilon protein.
Length = 2265
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 1547 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 1602
>AK074867-1|BAC11255.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ90386 fis, clone NT2RP2005378, weakly similar to
GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8 PRECURSOR.
).
Length = 519
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 565 LFKC*RTSETSCPEETVCLENKQVFGRVCSQRGIPN 672
L K RTS S E+T C NK + GRV + G PN
Sbjct: 276 LSKILRTSSGSIREKTACAINKVLMGRVPDRGGRPN 311
>AF127975-3|AAD44692.1| 2243|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform c protein.
Length = 2243
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 1525 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 1580
>AF127975-2|AAD44691.1| 2286|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform b protein.
Length = 2286
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 1568 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 1623
>AF127975-1|AAD44690.1| 2297|Homo sapiens DNA polymerase epsilon
catalytic subunit protein isoform a protein.
Length = 2297
Score = 31.5 bits (68), Expect = 4.1
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 542 VERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDI-YGSED 715
++RF+ L+Y EE P ++ S+W++ + E V EE+P I A I YG D
Sbjct: 1579 IQRFL-LAY--KEERRGPTLIAVQSSWELKRLASEIPVLEEFPLVPICVADKINYGVLD 1634
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,083,323
Number of Sequences: 237096
Number of extensions: 2551875
Number of successful extensions: 8049
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8039
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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