Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0413
         (861 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA...   135   8e-32
BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p pro...   105   1e-22
BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p pro...    91   2e-18

>AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA
           protein.
          Length = 416

 Score =  135 bits (326), Expect = 8e-32
 Identities = 65/94 (69%), Positives = 74/94 (78%)
 Frame = +3

Query: 255 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 434
           VGRYVCNKLGK GTQ+ILPYRGD  D  RLKV GDLGQVLF  Y+L D  SI  AV++SN
Sbjct: 75  VGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSN 134

Query: 435 VVINLVGRDYETKNFKYNDVHVDGVEELPESAEK 536
           VVINLVGRD+ETKNFK+ DVHV+G E +   A +
Sbjct: 135 VVINLVGRDFETKNFKFKDVHVNGAERIARIARE 168



 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 47/83 (56%), Positives = 55/83 (66%)
 Frame = +2

Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
           E GVER IHLS LN E +PK L +K  S W  SKY GE  VR+ +P ATIIR +DIYGSE
Sbjct: 168 EAGVERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSE 227

Query: 713 DRFLRSLVNKMRFSQQPMPLY*K 781
           DRFLR   +  R   + MPL+ K
Sbjct: 228 DRFLRYYAHIWRRQFRSMPLWHK 250



 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 24/27 (88%), Positives = 24/27 (88%)
 Frame = +1

Query: 172 NLAAYKRGTGGRSSFNGIVATVFGCTG 252
           N AA KRGTGGRSSFNGIVATVFG TG
Sbjct: 47  NPAAMKRGTGGRSSFNGIVATVFGATG 73


>BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p
           protein.
          Length = 327

 Score =  105 bits (251), Expect = 1e-22
 Identities = 51/79 (64%), Positives = 60/79 (75%)
 Frame = +3

Query: 300 LILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNF 479
           +ILPYRGD  D  RLKV GDLGQVLF  Y+L D  SI  AV++SNVVINLVGRD+ETKNF
Sbjct: 1   MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNF 60

Query: 480 KYNDVHVDGVEELPESAEK 536
           K+ DVHV+G E +   A +
Sbjct: 61  KFKDVHVNGAERIARIARE 79



 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 48/83 (57%), Positives = 56/83 (67%)
 Frame = +2

Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
           E GVERFIHLS LN E +PK L +K  S W  SKY GE  VR+ +P ATIIR +DIYGSE
Sbjct: 79  EAGVERFIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSE 138

Query: 713 DRFLRSLVNKMRFSQQPMPLY*K 781
           DRFLR   +  R   + MPL+ K
Sbjct: 139 DRFLRYYAHIWRRQFRSMPLWHK 161


>BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p
           protein.
          Length = 324

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 47/83 (56%), Positives = 55/83 (66%)
 Frame = +2

Query: 533 EEGVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSE 712
           E GVER IHLS LN E +PK L +K  S W  SKY GE  VR+ +P ATIIR +DIYGSE
Sbjct: 76  EAGVERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSE 135

Query: 713 DRFLRSLVNKMRFSQQPMPLY*K 781
           DRFLR   +  R   + MPL+ K
Sbjct: 136 DRFLRYYAHIWRRQFRSMPLWHK 158



 Score = 63.3 bits (147), Expect = 4e-10
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = +3

Query: 405 SIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVEELPESAEK 536
           SI  AV++SNVVINLVGRD+ETKNFK+ DVHV+G E +   A +
Sbjct: 33  SIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,693,656
Number of Sequences: 53049
Number of extensions: 775355
Number of successful extensions: 1960
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1957
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)