Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0413
         (861 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g20360.1 68415.m02377 expressed protein                             84   1e-16
At1g19540.1 68414.m02434 isoflavone reductase, putative similar ...    31   0.75 
At5g19060.1 68418.m02266 expressed protein ; expression supporte...    28   7.0  
At4g19170.1 68417.m02829 9-cis-epoxycarotenoid dioxygenase, puta...    28   7.0  
At2g13440.1 68415.m01483 glucose-inhibited division family A pro...    28   9.2  

>At2g20360.1 68415.m02377 expressed protein
          Length = 402

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 38/88 (43%), Positives = 60/88 (68%)
 Frame = +3

Query: 255 VGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSN 434
           +GRY+  +L K+G+Q+++P+RG     + LK+ GDLGQV+   +   DE+SI   +  +N
Sbjct: 80  LGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVPMKFDPRDEDSIKAVMAKAN 139

Query: 435 VVINLVGRDYETKNFKYNDVHVDGVEEL 518
           VVINL+GR+YET+NF + D +    E+L
Sbjct: 140 VVINLIGREYETRNFSFEDANHHIAEKL 167



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = +1

Query: 106 HLNGSMSVVYIKAANYSSDRKPNLAAYKRGTGGRSSFNGIVATVFGCTG 252
           HLNG+ +  Y  +++ ++    +LA  ++GTGGRSS +GIVATVFG TG
Sbjct: 34  HLNGTDNCRY--SSSLATKGVGHLA--RKGTGGRSSVSGIVATVFGATG 78



 Score = 32.7 bits (71), Expect = 0.32
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = +2

Query: 539 GVERFIHLSYLNAEEHPKPLVLKKPSAWKISKYLGECAVREEYPTATIIRASDIYGSEDR 718
           G+ R+I +S L A        +  PS    +K   E AV    P ATI+R + + G+EDR
Sbjct: 176 GIMRYIQVSCLGAS-------VSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTEDR 228

Query: 719 FL 724
            L
Sbjct: 229 IL 230


>At1g19540.1 68414.m02434 isoflavone reductase, putative similar to
           SP|P52577; contains isoflavone reductase domain PF02716
          Length = 310

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 20/61 (32%), Positives = 37/61 (60%)
 Frame = +3

Query: 333 AQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVE 512
           AQ ++   DLG  +     L D+ES+ KA++  +VVI+ VGR ++T+     ++ +D ++
Sbjct: 44  AQLVERFKDLGVTILYG-SLSDKESLVKAIKQVDVVISAVGR-FQTEILNQTNI-IDAIK 100

Query: 513 E 515
           E
Sbjct: 101 E 101


>At5g19060.1 68418.m02266 expressed protein ; expression supported
           by MPSS
          Length = 551

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 226 RCR*SYCGHQYLAYMLQGWVYDPNCS*RL 140
           RCR  +C     A    GWVY  +CS +L
Sbjct: 272 RCREPWCDGALSALESNGWVYSSHCSFKL 300


>At4g19170.1 68417.m02829 9-cis-epoxycarotenoid dioxygenase,
           putative / neoxanthin cleavage enzyme, putative /
           carotenoid cleavage dioxygenase, putative similar to
           9-cis-epoxycarotenoid dioxygenase [Phaseolus
           vulgaris][GI:6715257]; neoxanthin cleavage enzyme,
           Lycopersicon esculentum, PATX:E325797
          Length = 595

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 381 PYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVEELP 521
           PYHL D + +  A++  N    L  R    K +KYN     G   +P
Sbjct: 156 PYHLFDGDGMLHAIKIHNGKATLCSR--YVKTYKYNVEKQTGAPVMP 200


>At2g13440.1 68415.m01483 glucose-inhibited division family A
           protein similar to GidA from Pseudomonas syringae
           [GI:10764670]; contains Pfam profile PF01134 Glucose
           inhibited division protein A
          Length = 723

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = -1

Query: 369 PGLNLRTLSTFGHHRNRLCMVKLTGYQFF---PICCTHSVRQSGATENCGYDAV 217
           P L   + S+   H  RLC V L   Q F   P+  + S   SGAT +  YD +
Sbjct: 24  PSLLFSSSSSIPFHSPRLC-VFLRPRQLFLNRPLAASFSSSSSGATSDSTYDVI 76


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,198,688
Number of Sequences: 28952
Number of extensions: 373198
Number of successful extensions: 938
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)