Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0412
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   1.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.4  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   5.5  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   9.6  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.6  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
 Frame = -2

Query: 574 TKPQHFTCQQPPHXTNRVGRLGLHGIAMSTNLSGESDVAQSNHRNVDI*SFSNGLMVLCR 395
           ++ Q F  ++    TN+ G  GLHG+     L G S  A +        S   G      
Sbjct: 115 SREQRFLRRRLEQLTNQTGLHGLHGL---HGLHGLSSSAPTGS------SCGPGAAAAAA 165

Query: 394 VQYNQETRFTECSLDLVSKSTWCETSRNR-RSTG 296
           +  ++    +ECSL   S ++   +SRN  RS G
Sbjct: 166 L-LSKRRSVSECSLGTASSTSSTASSRNSDRSAG 198


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 609 TTSQRWSRGSTPRSLSTS 556
           T +Q WSRG+T  SL  S
Sbjct: 18  TQAQHWSRGNTWLSLDNS 35


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 609 TTSQRWSRGSTPRSLSTS 556
           T +Q WSRG+T  SL  S
Sbjct: 18  TQAQHWSRGNTWLSLDNS 35


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 572 RGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAK 670
           R +LPR ++  +   LF Y  P  SE ++  ++
Sbjct: 603 RLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSR 635


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 572 RGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAK 670
           R +LPR ++  +   LF Y  P  SE ++  ++
Sbjct: 603 RLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSR 635


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/55 (21%), Positives = 23/55 (41%)
 Frame = -2

Query: 364 ECSLDLVSKSTWCETSRNRRSTGVRXKLQYSTLTEGPDEMTNTSAGFSMATTARA 200
           +C+    S + W  TS    +TG R + Q     +   +   +S+ + M   + A
Sbjct: 770 QCATSNYSTTRWPATSVITTTTGARQQQQQQQQQQQQQQQQQSSSDYLMVGNSPA 824


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 232 LMCSSSHQALRSACCTEVCXAHR 300
           L+   S + LR   C E C  HR
Sbjct: 41  LLEDESERMLRKRGCIEACLFHR 63


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 364 ECSLDLVSKSTWCE 323
           E S+DLV  ST+CE
Sbjct: 260 ERSVDLVVTSTYCE 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,317
Number of Sequences: 438
Number of extensions: 5253
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)