Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0411
         (838 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54XN6 Cluster: Putative uncharacterized protein; n=1; ...    36   1.3  
UniRef50_Q23R31 Cluster: Putative uncharacterized protein; n=1; ...    36   1.3  
UniRef50_Q22NG0 Cluster: Putative uncharacterized protein; n=2; ...    35   2.9  
UniRef50_Q7RFL3 Cluster: Putative uncharacterized protein PY0469...    34   3.8  
UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD...    34   5.1  
UniRef50_UPI000150AB18 Cluster: hypothetical protein TTHERM_0076...    33   6.7  
UniRef50_UPI000150ABCD Cluster: hypothetical protein TTHERM_0082...    33   8.9  
UniRef50_Q7RJ40 Cluster: Putative uncharacterized protein PY0342...    33   8.9  
UniRef50_A5DQH2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_Q54XN6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 563

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 28/106 (26%), Positives = 48/106 (45%)
 Frame = -1

Query: 655 NLIIQLYQFQQSDLIRSILNFNLWIIKNNKIMNLFKGHSVTTMIQKYLILCYIACRLHLQ 476
           N++ +L +F++  L R  LN   W+I + K+   F+  S+      YL+      +   +
Sbjct: 396 NILKRLLKFERDVLSRLNLNHQCWLIYHIKLSKTFEKLSLVYNNFDYLVQSIQHYKELTR 455

Query: 475 QCNAIINEPTRGVIALGRTSAGFIKDKYLLTLVVP*KSNFDYN*LK 338
              +I    T G +       G I +KYLL+L+   K    +N LK
Sbjct: 456 HVESIFKSSTSGELVDCYYHLGRINEKYLLSLI---KQRNQFNQLK 498


>UniRef50_Q23R31 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 3295

 Score = 35.9 bits (79), Expect = 1.3
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
 Frame = -1

Query: 661  LYNLIIQLYQFQQSDLIRSILNFNLWIIKNNKIMNLFKGHSVTTMIQKYLILCYIACRLH 482
            L N+I        +  +  + N    ++KN    N+   H+   ++ K +   +IA  L 
Sbjct: 1703 LENIIFDSIDLDNNSTLLKLTNLQFVLLKNITFTNITLHHTAKLILLKNIFRFFIA-NLT 1761

Query: 481  LQQCNAIINEPTRGVIALGRTSAGFIKDKYL--LTLVVP 371
            +   N + N  +  +I +     GFIKD +L  L LV P
Sbjct: 1762 INGMN-LYNPESTSIIQISNIKNGFIKDSFLSDLKLVEP 1799


>UniRef50_Q22NG0 Cluster: Putative uncharacterized protein; n=2;
            Alveolata|Rep: Putative uncharacterized protein -
            Tetrahymena thermophila SB210
          Length = 2707

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 18/71 (25%), Positives = 41/71 (57%)
 Frame = -1

Query: 763  LSSSTHLSNKKIKYINLYE*NMNMLII*YELNSTLYNLIIQLYQFQQSDLIRSILNFNLW 584
            ++ + +L+ K  K + +Y  ++++  I    N  L  L +  Y+++Q+D    +++FNL 
Sbjct: 1036 INLNQNLTTKSYKLVQIYTRSIDIFQI---SNKNLDILPLLCYKYEQNDYFHDLIDFNLV 1092

Query: 583  IIKNNKIMNLF 551
             +++NK+  LF
Sbjct: 1093 QVQSNKLHILF 1103


>UniRef50_Q7RFL3 Cluster: Putative uncharacterized protein PY04693;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY04693 - Plasmodium yoelii
           yoelii
          Length = 408

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +3

Query: 102 FF*IMH*KYIKNKKNITHYHVFDTHTLYFLCLLSNFYYCLKSVV-KLRI 245
           F+ I++ KYI  KKNI  Y+ F T    FL + + F+  L  ++ +LR+
Sbjct: 313 FYIIIYLKYIYRKKNIIEYNEFITPNFIFLLIQTIFFIFLMLIIARLRV 361


>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
           protein - Plasmodium falciparum
          Length = 960

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 21/60 (35%), Positives = 32/60 (53%)
 Frame = -1

Query: 727 KYINLYE*NMNMLII*YELNSTLYNLIIQLYQFQQSDLIRSILNFNLWIIKNNKIMNLFK 548
           KY+N Y+   N L    + N+ LY   I  Y + +  L+ +   +NL+II NN I  L+K
Sbjct: 572 KYLNFYKYTYNKLFFIKKYNNFLYLYEIFKYNWYKYLLLNN--KYNLYIIYNNYIKYLYK 629


>UniRef50_UPI000150AB18 Cluster: hypothetical protein
           TTHERM_00760640; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00760640 - Tetrahymena
           thermophila SB210
          Length = 989

 Score = 33.5 bits (73), Expect = 6.7
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = -1

Query: 676 ELNSTLYNLIIQLYQFQQSDLIRSILNFNLWIIKNNKIMNLFKGHSV--TTMIQKY 515
           + N   YN  +Q YQF+  + I+  LN  L  +K+N  + + K H++    +IQ+Y
Sbjct: 361 QYNYLQYNQSLQQYQFENQEEIKKSLNHLLQDVKSN--LQIMKNHTIQYNNLIQEY 414


>UniRef50_UPI000150ABCD Cluster: hypothetical protein
           TTHERM_00824040; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00824040 - Tetrahymena
           thermophila SB210
          Length = 2045

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
 Frame = -1

Query: 673 LNSTLYNLIIQLYQFQQSDLIRSILNFNLWIIKNNKIM-----NLFKGHSVTTMIQKYLI 509
           +N+  + L  +LY    SD+ R+ ++ N +I+  NK       NLF+  S  T  + +  
Sbjct: 483 MNTLQHILDTELYHKMLSDVFRNCIDLNGFILPENKYQVNNSANLFQQTSKNTNEEFHNF 542

Query: 508 LCYIACRLHLQQCNAIINEPTR 443
           LCY    L +   N  + + T+
Sbjct: 543 LCYFIYLLKICNKNVHVGQSTK 564


>UniRef50_Q7RJ40 Cluster: Putative uncharacterized protein PY03424;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY03424 - Plasmodium yoelii yoelii
          Length = 1856

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = -1

Query: 688 II*YELNSTLYNLIIQLYQFQQSDLIRSILNFNLWIIKN-NKIMN--LFKGHSVTTMIQK 518
           II   L+  +YN+ I  Y   ++ +   I N  L+ +K+ N +++   F  HS++ +  K
Sbjct: 342 IITKHLHVNIYNMYINYYNLMENIMFNPIFNNILFKLKDYNTLIDYIFFCNHSISFLKLK 401

Query: 517 YLILCYI 497
           Y+I  YI
Sbjct: 402 YIIYMYI 408


>UniRef50_A5DQH2 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 613

 Score = 33.1 bits (72), Expect = 8.9
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -2

Query: 327 EHYYGSIVKNYYISIVTNFAKKDKHINLFSI*LQTLSNNKSLTINKENKVCVCQIH 160
           +HY   +   YY   V      + H++ F+  LQ L N+ +L I++ NK C   +H
Sbjct: 459 QHYVSQVNMKYYYLFVEMDQVSESHLSQFT--LQFLLNSFTLLISENNKNCGLSLH 512


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,801,791
Number of Sequences: 1657284
Number of extensions: 12309205
Number of successful extensions: 29266
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29260
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)