Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0411
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50071-3|CAA90407.1|  613|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z50071-2|CAA90406.1|  638|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z50071-3|CAA90407.1|  613|Caenorhabditis elegans Hypothetical
           protein T07D4.4c protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 676 ELNSTLYNLIIQLYQFQQSDLIRS-----ILNFNLWIIKNNKIMNLFKGHSVTTMIQKYL 512
           ++++T+YN++       QS L  +     ++NF   IIKN  ++ L +       I+++ 
Sbjct: 374 DISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFY 433

Query: 511 ILCYIACR 488
           + C  ACR
Sbjct: 434 VQC--ACR 439


>Z50071-2|CAA90406.1|  638|Caenorhabditis elegans Hypothetical
           protein T07D4.4b protein.
          Length = 638

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 676 ELNSTLYNLIIQLYQFQQSDLIRS-----ILNFNLWIIKNNKIMNLFKGHSVTTMIQKYL 512
           ++++T+YN++       QS L  +     ++NF   IIKN  ++ L +       I+++ 
Sbjct: 399 DISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFY 458

Query: 511 ILCYIACR 488
           + C  ACR
Sbjct: 459 VQC--ACR 464


>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
           protein T07D4.4a protein.
          Length = 1022

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
 Frame = -1

Query: 676 ELNSTLYNLIIQLYQFQQSDLIRS-----ILNFNLWIIKNNKIMNLFKGHSVTTMIQKYL 512
           ++++T+YN++       QS L  +     ++NF   IIKN  ++ L +       I+++ 
Sbjct: 783 DISTTIYNMVEDASDSVQSMLFSATYDEPVINFATKIIKNAIVVMLKREEQALPNIKQFY 842

Query: 511 ILCYIACR 488
           + C  ACR
Sbjct: 843 VQC--ACR 848


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,798,248
Number of Sequences: 27780
Number of extensions: 304347
Number of successful extensions: 723
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)