Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0410
         (756 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0889 + 7426680-7427396,7428073-7428222,7429296-7429601           31   1.3  
02_02_0491 - 10896463-10897172,10897246-10897353,10897457-108975...    29   4.0  
12_02_0044 - 12807372-12807555,12807782-12807840,12807943-128080...    29   5.3  
01_06_0569 + 30313337-30313650,30314271-30314353,30314763-303148...    29   5.3  
04_04_0669 + 27110654-27111283                                         28   9.2  
01_05_0714 + 24555494-24555637,24555884-24556071,24556195-245562...    28   9.2  

>07_01_0889 + 7426680-7427396,7428073-7428222,7429296-7429601
          Length = 390

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = -1

Query: 522 HTHVRRNFSISISMTSLTVASEATRXALRCYLLTQILEVE-THHTVELQILIGFAER-EQ 349
           HTH     +   S     V  +     LR  +++Q+LE+    H+V + I +G ++  E 
Sbjct: 205 HTHATHGHAHGSSALVAAVGEDDKETTLRHRVISQVLELGIVVHSVIIGISLGASQNPET 264

Query: 348 IEPVGVPLVYH 316
           I+P+ V L +H
Sbjct: 265 IKPLVVALSFH 275


>02_02_0491 -
           10896463-10897172,10897246-10897353,10897457-10897558,
           10897674-10897772,10898995-10899093,10900622-10900943
          Length = 479

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 709 WSPLSDPMTEASLLVRHL-SRNLPSLSSAWPVE 614
           W P  DP T + ++  HL + N P + +A+PV+
Sbjct: 122 WKPDQDPSTPSLVVAHHLPNGNAPFIDAAYPVK 154


>12_02_0044 -
           12807372-12807555,12807782-12807840,12807943-12808072,
           12808160-12808224,12808318-12808506,12808574-12809119,
           12809258-12809497,12809598-12810032
          Length = 615

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -3

Query: 313 CEALHAPTYACPLGPSCHRISPVF 242
           C  LH  TYAC L  S +  SPVF
Sbjct: 356 CHTLHLETYACALS-SVYTFSPVF 378


>01_06_0569 +
           30313337-30313650,30314271-30314353,30314763-30314876,
           30315876-30315938,30316289-30316380,30316464-30316544,
           30316629-30316727,30316795-30316933,30317017-30317165
          Length = 377

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -3

Query: 481 DIADGGVGGDTXCTSLLSSDPDLGSRNAS 395
           +I DGG GGDT  T L S +  L     S
Sbjct: 178 EITDGGAGGDTSSTGLFSGNLSLDMSEGS 206


>04_04_0669 + 27110654-27111283
          Length = 209

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 508 SDMRMLSLGSYSLWETHGPDDERQLEPHEKAAPRATQLATRM 633
           SD R   +   +L +    DDE  + PHE AA RA   A+ M
Sbjct: 140 SDRRRRGVQHEALNDEEDDDDELVVPPHEMAARRAAAAASVM 181


>01_05_0714 +
           24555494-24555637,24555884-24556071,24556195-24556280,
           24556359-24556461,24556798-24557000,24557077-24557681,
           24557784-24557918,24558040-24558067,24559517-24559596,
           24559873-24559975,24560553-24560635,24560915-24561017,
           24561596-24561720,24562001-24562103,24562647-24562726,
           24563322-24563429,24563521-24563565
          Length = 773

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +1

Query: 493 NREIPSDMRMLSLGSYSLWETHGPDDERQLEPH--EKAAPRATQLATRMIEKGDSY 654
           N++ PS  +  + G     ETH P+ E +++PH  +        L  R++++   Y
Sbjct: 684 NKKQPSKRQKRAAGEAGDLETHAPNFEPEIQPHVQDTDVEMRVLLGKRVLDEAHEY 739


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,300,339
Number of Sequences: 37544
Number of extensions: 356391
Number of successful extensions: 976
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)